U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from SRA

Uncultivated Marinobacter sp. UBA4489 genome recovered from SRX621521

Identifiers
BioSample: SAMN06455146; Sample name: Marinobacter sp. UBA4489; SRA: SRS2034378
Organism
Marinobacter sp. UBA4489
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Marinobacteraceae; Marinobacter; unclassified Marinobacter
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA: Washington, DC
isolateUBA4489
isolation sourceBiofilm grown on the Cathode of a Microbial Fuel Cell (Biofilm MCL)
metagenome sourcebiofilm metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX621521 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated98.71%
contamination_estimated1.10%
environmental_sampletrue
genome_coverage67.01
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the biofilm metagenome reads: SRR1450398.
Description

Uncultivated genome recovered from an assembly of the SRX621521 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06455146
ID:
6455146

BioProject SRA Nucleotide

Supplemental Content

Related information

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center