U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Euryarchaeota archaeon UBA485 genome recovered from ERX552297

Identifiers
BioSample: SAMN06027235; Sample name: Euryarchaeota archaeon UBA485; SRA: SRS1809368
Organism
Euryarchaeota archaeon UBA485
cellular organisms; Archaea; Methanobacteriati; Thermoplasmatota; Candidatus Poseidoniia; Candidatus Poseidoniales; unclassified Candidatus Poseidoniales
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationmissing
isolateUBA485
isolation sourcesaline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX552297
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated71.07%
contamination_estimated0.80%
environmental-sampleTRUE
genome_coverage24.73
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomicTRUE
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
Description

Uncultivated genome recovered from an assembly of the ERX552297 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2016-11-16
Accession:
SAMN06027235
ID:
6027235

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center