U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Candidatus UAP3 archaeon UBA460 genome recovered from SRX740703

Identifiers
BioSample: SAMN06027478; Sample name: Candidatus UAP3 archaeon UBA460; SRA: SRS1809243
Organism
archaeon UBA460
cellular organisms; Archaea; unclassified Archaea
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCosta Rica
isolateUBA460
isolation sourcesediment
metagenome sourcemarine sediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX740703
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated71.89%
contamination_estimated3.74%
environmental-sampleTRUE
genome_coverage17.37
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomicTRUE
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
Description

Uncultivated genome recovered from an assembly of the SRX740703 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2016-11-16
Accession:
SAMN06027478
ID:
6027478

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center