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Uncultivated Akkermansia sp. UBA5128 genome recovered from SRX147036

Identifiers
BioSample: SAMN06450957; Sample name: Akkermansia sp. UBA5128; SRA: SRS2032330
Organism
Akkermansia sp. UBA5128
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; Verrucomicrobiia; Verrucomicrobiales; Akkermansiaceae; Akkermansia; unclassified Akkermansia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5128
isolation sourceguineaPig1
metagenome sourceCavia porcellus metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX147036 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated69.12%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage12.48
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the Cavia porcellus metagenome reads: SRR495409.
Description

Uncultivated genome recovered from an assembly of the SRX147036 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450957
ID:
6450957

BioProject SRA Nucleotide

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