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Uncultivated Brevundimonas sp. UBA4553 genome recovered from SRX822531

Identifiers
BioSample: SAMN06456269; Sample name: Brevundimonas sp. UBA4553; SRA: SRS2038967
Organism
Brevundimonas sp. UBA4553
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas; unclassified Brevundimonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA4553
isolation sourcewood
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX822531 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.76%
contamination_estimated0.49%
environmental_sampletrue
genome_coverage19.34
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749148.
Description

Uncultivated genome recovered from an assembly of the SRX822531 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456269
ID:
6456269

BioProject SRA Nucleotide

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