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Uncultivated Lachnoclostridium sp. UBA3320 genome recovered from SRX803753

Identifiers
BioSample: SAMN06453118; Sample name: Lachnoclostridium sp. UBA3320; SRA: SRS2038276
Organism
Lachnoclostridium sp. UBA3320
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium; unclassified Lachnoclostridium
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3320
isolation sourcerat gut
metagenome sourcerat gut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX803753 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.30%
contamination_estimated0.68%
environmental_sampletrue
genome_coverage68.22
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the rat gut metagenome reads: SRR1702555.
Description

Uncultivated genome recovered from an assembly of the SRX803753 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453118
ID:
6453118

BioProject SRA Nucleotide

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