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Uncultivated Lachnospira sp. UBA3852 genome recovered from SRX290718

Identifiers
BioSample: SAMN06453616; Sample name: Lachnospira sp. UBA3852; SRA: SRS2033117
Organism
Lachnospira sp. UBA3852
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; unclassified Lachnospira
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA3852
isolation sourcehigh methane producing sheep
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX290718 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated96.02%
contamination_estimated0.67%
environmental_sampletrue
genome_coverage36.59
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR873608.
Description

Uncultivated genome recovered from an assembly of the SRX290718 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453616
ID:
6453616

BioProject SRA Nucleotide

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