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Uncultivated Lachnospira sp. UBA5912 genome recovered from SRX834619

Identifiers
BioSample: SAMN06451014; Sample name: Lachnospira sp. UBA5912; SRA: SRS2034939
Organism
Lachnospira sp. UBA5912
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; unclassified Lachnospira
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationKenya
isolateUBA5912
isolation sourcefeces
metagenome sourcegut metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX834619 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated72.31%
contamination_estimated2.01%
environmental_sampletrue
genome_coverage10.91
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the gut metagenome reads: SRR1747018.
Description

Uncultivated genome recovered from an assembly of the SRX834619 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451014
ID:
6451014

BioProject SRA Nucleotide

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