U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Pelotomaculum sp. UBA3103 genome recovered from SRX993394

Identifiers
BioSample: SAMN06456481; Sample name: Pelotomaculum sp. UBA3103; SRA: SRS2035523
Organism
Pelotomaculum sp. UBA3103
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Desulfotomaculaceae; Pelotomaculum; unclassified Pelotomaculum
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationArctic Ocean: Arctic deep sea, Hakon Mosby Mud Volcano
isolateUBA3103
isolation sourcesediment
metagenome sourcemarine sediment metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX993394 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated78.95%
contamination_estimated3.51%
environmental_sampletrue
genome_coverage17.93
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine sediment metagenome reads: SRR1971620.
Description

Uncultivated genome recovered from an assembly of the SRX993394 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06456481
ID:
6456481

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center