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Uncultivated Stenotrophomonas sp. UBA6759 genome recovered from SRX823219

Identifiers
BioSample: SAMN06452213; Sample name: Stenotrophomonas sp. UBA6759; SRA: SRS2034717
Organism
Stenotrophomonas sp. UBA6759
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Stenotrophomonas; unclassified Stenotrophomonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationUSA:New York City
isolateUBA6759
isolation sourcemetal
metagenome sourceterrestrial metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX823219 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated62.40%
contamination_estimated1.72%
environmental_sampletrue
genome_coverage39.6
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the terrestrial metagenome reads: SRR1749839.
Description

Uncultivated genome recovered from an assembly of the SRX823219 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452213
ID:
6452213

BioProject SRA Nucleotide

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