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Uncultivated Sulfurovum sp. UBA6199 genome recovered from SRX327522

Identifiers
BioSample: SAMN06457393; Sample name: Sulfurovum sp. UBA6199; SRA: SRS2033401
Organism
Sulfurovum sp. UBA6199
cellular organisms; Bacteria; Pseudomonadati; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Sulfurovaceae; Sulfurovum; unclassified Sulfurovum
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Medicine Hat Glauconitic field
isolateUBA6199
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX327522 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated93.03%
contamination_estimated0.41%
environmental_sampletrue
genome_coverage372.04
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR943321,SRR943320,SRR943319,SRR943317,SRR942928,SRR943316,SRR943318.
Description

Uncultivated genome recovered from an assembly of the SRX327522 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457393
ID:
6457393

BioProject SRA Nucleotide

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