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Uncultivated Syntrophomonas sp. UBA4844 genome recovered from SRX691272

Identifiers
BioSample: SAMN06452757; Sample name: Syntrophomonas sp. UBA4844; SRA: SRS2035782
Organism
Syntrophomonas sp. UBA4844
cellular organisms; Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Syntrophomonadaceae; Syntrophomonas; unclassified Syntrophomonas
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationChina: Luzhou
isolateUBA4844
isolation sourcemud
metagenome sourcefermentation metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX691272 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated97.81%
contamination_estimated3.95%
environmental_sampletrue
genome_coverage47.67
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the fermentation metagenome reads: SRR1561997.
Description

Uncultivated genome recovered from an assembly of the SRX691272 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06452757
ID:
6452757

BioProject SRA Nucleotide

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