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Uncultivated Thiothrix sp. UBA5583 genome recovered from SRX646137

Identifiers
BioSample: SAMN06450874; Sample name: Thiothrix sp. UBA5583; SRA: SRS2034407
Organism
Thiothrix sp. UBA5583
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix; unclassified Thiothrix
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationAustralia: Brisbane, Thorneside Wastewater Treatment Plant
isolateUBA5583
isolation sourceactivated sludge
metagenome sourcebioreactor sludge metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX646137 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated99.31%
contamination_estimated0.34%
environmental_sampletrue
genome_coverage160.68
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor sludge metagenome reads: SRR1506967.
Description

Uncultivated genome recovered from an assembly of the SRX646137 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06450874
ID:
6450874

BioProject SRA Nucleotide

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