U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Uncultivated Proteobacteria bacterium UBA868 genome recovered from SRX672316

Identifiers
BioSample: SAMN06457893; Sample name: Proteobacteria bacterium UBA868; SRA: SRS2035578
Organism
Proteobacteria bacterium UBA868
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; unclassified Pseudomonadota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationSpain: off the coast of Alicante
isolateUBA868
isolation sourcewater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX672316 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated56.24%
contamination_estimated0.81%
environmental_sampletrue
genome_coverage9.81
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1539383.
Description

Uncultivated genome recovered from an assembly of the SRX672316 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457893
ID:
6457893

BioProject SRA Nucleotide

Supplemental Content

Related information

Search details

See more...

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
You are here: NCBI > DNA & RNA > BioSample
Support Center