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Uncultivated Verrucomicrobia bacterium UBA1412 genome recovered from ERX250271

Identifiers
BioSample: SAMN06457131; Sample name: Verrucomicrobia bacterium UBA1412; SRA: SRS2030566
Organism
Verrucomicrobia bacterium UBA1412
cellular organisms; Bacteria; Pseudomonadati; PVC group; Verrucomicrobiota; unclassified Verrucomicrobiota
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationMalaysia
isolateUBA1412
isolation sourceclosed biodigester
metagenome sourcepalm oil mill effluent metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in ERX250271 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated62.56%
contamination_estimated0.68%
environmental_sampletrue
genome_coverage21.15
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the palm oil mill effluent metagenome reads: ERR276848.
Description

Uncultivated genome recovered from an assembly of the ERX250271 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06457131
ID:
6457131

BioProject SRA Nucleotide

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