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Uncultivated Dehalococcoidia bacterium UBA5748 genome recovered from SRX210886

Identifiers
BioSample: SAMN06451748; Sample name: Dehalococcoidia bacterium UBA5748; SRA: SRS2032527
Organism
Dehalococcoidia bacterium UBA5748
cellular organisms; Bacteria; Bacillati; Chloroflexota; Dehalococcoidia; unclassified Dehalococcoidia
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationCanada: Northern Alberta
isolateUBA5748
isolation sourcewaste water
metagenome sourcehydrocarbon metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX210886 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated90.26%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage79.29
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the hydrocarbon metagenome reads: SRR636559.
Description

Uncultivated genome recovered from an assembly of the SRX210886 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06451748
ID:
6451748

BioProject SRA Nucleotide

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