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Uncultivated Porticoccaceae bacterium UBA7411 genome recovered from SRX802982

Identifiers
BioSample: SAMN06453677; Sample name: Porticoccaceae bacterium UBA7411; SRA: SRS2036429
Organism
Porticoccaceae bacterium UBA7411
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Cellvibrionales; Porticoccaceae; unclassified Porticoccaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNorth Sea
isolateUBA7411
isolation sourceSubsurface seawater
metagenome sourcemarine metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX802982 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated80.69%
contamination_estimated0.00%
environmental_sampletrue
genome_coverage193.84
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the marine metagenome reads: SRR1700501.
Description

Uncultivated genome recovered from an assembly of the SRX802982 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453677
ID:
6453677

BioProject SRA Nucleotide

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