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Uncultivated Syntrophaceae bacterium UBA5828 genome recovered from SRX392460

Identifiers
BioSample: SAMN06453965; Sample name: Syntrophaceae bacterium UBA5828; SRA: SRS2033746
Organism
Syntrophaceae bacterium UBA5828
cellular organisms; Bacteria; Pseudomonadati; Thermodesulfobacteriota; Syntrophia; Syntrophales; Syntrophaceae; unclassified Syntrophaceae
Package
Microbe; version 1.0
Attributes
collection datenot applicable
geographic locationNULL
isolateUBA5828
isolation sourcebioreactor
metagenome sourcebioreactor metagenome
sample typemetagenomic assembly
subsource noteGenome binned from sequencing reads available in SRX392460 metagenome
assembly_methodCLC de novo assembler
assembly_method_version4.4.1
completeness_estimated84.48%
contamination_estimated3.23%
environmental_sampletrue
genome_coverage8.83
mapping_methodBWA (BWA-MEM)
mapping_method_version0.7.12-r1039
metagenomictrue
quality_assessment_methodCheckM
quality_assessment_method_version1.0.6
valueThis BioSample is a metagenomic assembly obtained from the bioreactor metagenome reads: SRR1050519.
Description

Uncultivated genome recovered from an assembly of the SRX392460 metagenome.

BioProject
PRJNA348753 metagenomes
Retrieve all samples from this project

Submission
University of Queensland, Donovan Parks; 2017-02-27
Accession:
SAMN06453965
ID:
6453965

BioProject SRA Nucleotide

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