A founder variant is a pathogenic variant observed at high frequency in a specific population due to the presence of the variant in a single ancestor or small number of ancestors. The presence of a founder variant can affect the approach to molecular genetic testing. When one or more founder variants account for a large percentage of all pathogenic variants found in a population, testing for the founder variant(s) may be performed first.
The table below includes common founder variants – here defined as three or fewer variants that account for >50% of the pathogenic variants identified in a single gene in individuals of a specific ancestry – in individuals of Inuit ancestry. Note: Pathogenic variants that are common worldwide due to a DNA sequence hot spot are not considered founder variants and thus are not included.
References
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- Hansen TV, Ejlertsen B, Albrechtsen A, Bergsten E, Bjerregaard P, Hansen T, Myrhøj T, Nielsen PB, Timmermans-Wielenga V, Andersen MK, Jønson L, Nielsen FC. A common Greenlandic Inuit BRCA1 RING domain founder mutation. Breast Cancer Res Treat. 2009;115:69-76. [PubMed: 18500671]
- Hansen TV, Jønson L, Albrechtsen A, Steffensen AY, Bergsten E, Myrhøj T, Ejlertsen B, Nielsen FC. Identification of a novel BRCA1 nucleotide 4803delCC/c.4684delCC mutation and a nucleotide 249T>A/c.130T>A (p.Cys44Ser) mutation in two Greenlandic Inuit families: implications for genetic screening of Greenlandic Inuit families with high risk for breast and/or ovarian cancer. Breast Cancer Res Treat. 2010;124:259-64. [PubMed: 20437199]
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- Lines MA, Rupar CA, Rip JW, Baskin B, Ray PN, Hegele RA, Grynspan D, Michaud J, Geraghty MT. Infantile sialic acid storage disease: two unrelated Inuit cases homozygous for a common novel SLC17A5 mutation. JIMD Rep. 2014;12:79-84. [PMC free article: PMC3897797] [PubMed: 23900835]
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- Ravn K, Chloupkova M, Christensen E, Brandt NJ, Simonsen H, Kraus JP, Nielsen IM, Skovby F, Schwartz M. High incidence of propionic acidemia in Greenland is due to a prevalent mutation, 1540insCCC, in the gene for the β-subunit of propionyl CoA carboxylase. Am J Hum Genet. 2000;67:203-6. [PMC free article: PMC1287078] [PubMed: 10820128]
- Rousseau-Nepton I, Okubo M, Grabs R, the FORGE Canada Consortium, Mitchell J, Polychronakos C, Rodd C. A founder AGL mutation causing glycogen storage disease type IIIa in Inuit identified through whole-exome sequencing: a case series. CMAJ. 2015;187:E68-73. [PMC free article: PMC4312169] [PubMed: 25602008]
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Revision History
- 24 August 2023 (sw) Revision: updated reference sequences
- 24 November 2021 (sw) Revision: added Fanconi anemia
- 27 December 2018 (sw) Initial posting
Publication Details
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Perkin-Elmer Genomics, Inc
Pittsburgh, Pennsylvania
Publication History
Initial Posting: December 27, 2018; Last Revision: August 24, 2023.
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NLM Citation
Wallace SE, Bean LJH. Resources for Genetics Professionals — Genetic Disorders Associated with Founder Variants Common in the Inuit Population. 2018 Dec 27 [Updated 2023 Aug 24]. In: Adam MP, Feldman J, Mirzaa GM, et al., editors. GeneReviews® [Internet]. Seattle (WA): University of Washington, Seattle; 1993-2025.