Conserved Protein Domain Family
KLF5_N

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cd21579: KLF5_N 
N-terminal domain of Kruppel-like factor 5
Kruppel-like factor 5 (KLF5; also known as also known as Krueppel-like factor 5; intestinal enriched Kruppel-like factor/IKLF; basic transcription element binding protein 2/BTEB2) a protein that in humans is encoded by the KLF5 gene. KLF5 is involved in numerous functions in eukaryotic cells, such as proliferation, migration, and differentiation. The loss of KLF5 expression is associated with tumors of the breast, cervix, endometrium, ovary, and prostate. KLF5 mediates the expression of several genes essential for proper cardiac structure and function, and plays a role in familial dilated cardiomyopathy. It functions as a transcriptional activator. KLF5 exhibits both transcriptional activation activity as well as trans-activating function. It belongs to a family of proteins called the Specificity Protein (SP)/KLF family, characterized by a C-terminal DNA-binding domain of 81 amino acids consisting of three Kruppel-like C2H2 zinc fingers. These factors bind to a loose consensus motif, namely NNRCRCCYY (where N is any nucleotide; R is A/G, and Y is C/T), such as the recurring motifs in GC and GT boxes (5'-GGGGCGGGG-3' and 5-GGTGTGGGG-3') that are present in promoters and more distal regulatory elements of mammalian genes. Members of the KLF family can act as activators or repressors of transcription depending on cell and promoter context. KLFs regulate various cellular functions, such as proliferation, differentiation, and apoptosis, as well as the development and homeostasis of several types of tissue. In addition to the C-terminal DNA-binding domain, each KLF also has a unique N-terminal activation/repression domain that confers specificity and allows it to bind specifically to a certain partner, leading to distinct activities in vivo. This model represents the N-terminal domain of KLF5.
Statistics
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PSSM-Id: 410335
Aligned: 62 rows
Threshold Bit Score: 234.804
Created: 11-Feb-2020
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q13887         3 TRVLSMSARLgpvpqppapqdePVFAQLKPVLGAANpardaalfpgeelkhahhrpqaqpapaqapqpaqppatgprlpp 82  human
XP_018584650   9 SAGLGPGPGPglg------qedALGALLRPALLPDDiqggeesdlfagg------------------dtksairerdpra 64  Asian bonytongue
KTG36643       3 ATLLTMSASLapg-------qdDFLSLLKPSLSDGFqedsslfsfet-----------------------knpdterils 52  common carp
XP_026865480   3 ATLLTMSASLatg-------qdEFFTLLKPTLSDGFqeeaslfsfds-----------------------knteserlla 52  electric eel
XP_030636521   3 ATLLTMSTGLapg-------qdEFLTLLKPSLSDTFqddpslfsfdv-----------------------knsdsergls 52  milkfish
XP_028835512  25 ATLVTMSAGLapg-------qeDFYSLLKPSPADAFqedpslfg-----------------------------epgraas 68  denticle herring
XP_010864920   3 ATLITMSAGSglgp----gqdeMFYTLLKPMLSDGFqaeesaffgfdt---------------------knapadrsgqn 57  northern pike
XP_031676879   3 ATLITMSAGTgtg------qdeMFYTLLKPMLSEGFpaeesalfgfdt--------------------knlltersgqse 56  coho salmon
XP_019715856   2 AATLAMSGGGggh-------eePFYPLHKASLPAGFhledfglefk-------------------------msesdrggh 49  tiger tail seah...
XP_030234976   2 AATLAMSGGGqd---------ePFYPLLKSTIPDDFsleesalfgld----------------------skitdaerngh 50  Atlantic cod
Q13887        83 EDLVQTRCEMEKYLTPQlppv---piiPEHKKYRRDSASVVDQFFTDte-gLPYSINMNVFLPDiTHLRTGLYKSQRPCV 158 human
XP_018584650  65 DYNIQAKLEMDKYLTPQll------nlPEAKKSRRDSASVVDQYFSEe--gSPYSINMNVFLPEfNYLRTSLCRPPRPAV 136 Asian bonytongue
KTG36643      53 NDYSQAKLEMDKYLSPQpv------alPDPKKSRRESFSEMDQFFGDdh-gSPYSINMNVFLPDiAYLRTGMCRPARPSA 125 common carp
XP_026865480  53 NDYAQARLEMDKYLTPQpq------asLLAKKNRRESPSAMDQFFMDdq-gSPYSINMNVYLPDiACLRTSLCRPARASM 125 electric eel
XP_030636521  53 NDYIQAKLEMDKYLTPQpp------vlPDLKKSRRESASVVDQFFGEdq-gSPYSINMNVYLPDiAYLRTGLCRPTRSSI 125 milkfish
XP_028835512  69 NDYCQAKFEMDKYLSPQa--------pVEPKKSRRDSASVVDQFFCEdq-gSPYSVNMNVYLPDiAYLRTGLCRPSSRLT 139 denticle herring
XP_010864920  58 DYAQDGKCELDKYLSPQvlmp---ppnPPEQTSRRDSASGVDQFFGEdqsgSPYSINMNVYLPDlAYLRMGLCRPTRHCP 134 northern pike
XP_031676879  57 YVHQTGKSELDKYLSPQtpllmshpdpPEQNKSRRDSASVMDHFFGDdqggSPYSINMNVFLPDlAYLRMGLCRPARPGP 136 coho salmon
XP_019715856  50 GVYTQAKCEMDRYLSPEp--------lADTLKAQRESAAGVDHFFGE----APYTLNMNLFLPDvAYPRPGLAQPPRPPQ 117 tiger tail seah...
XP_030234976  51 NEYIQTKCELDRYLSQVplppl-sdglQQQQKSRRDSVSNMDQFFSDdqafAPYTLNMNLYLPDvAYLRMGLCRPTRLPQ 129 Atlantic cod
Q13887       159 THIKTEPvaifshqs--------------------------------------------ettapppaPTQALPEFTSIFS 194 human
XP_018584650 137 THIKAEPmsfqhp------------------------------------------------scphsgAEPTLPEFTSVFS 168 Asian bonytongue
KTG36643     126 PSQIKTEpvvapfshp------------------------------------------ecsvsstgpVSSALPNFTSIFN 163 common carp
XP_026865480 126 PSQAKGKplnqafs----------------------------------------------ppqdsisAAPALPEFTSIFS 159 electric eel
XP_030636521 126 TCQIKTEpavspfahp-------------------------------------------ecagasssAPPALPEFTSVFS 162 milkfish
XP_028835512 140 ACGQVKTepvvsppfahp---------------------------------------dcvganvrvaANPTLPEFTSIFA 180 denticle herring
XP_010864920 135 SNVGGGLglqvktepsssspfvhph-------------------------phcpsssggsvsvsavmTPSSLPEFTSVFS 189 northern pike
XP_031676879 137 GGNGGGMgqqvkteppasspfthphp----------------------hcpsssvhsnsislstvtsVSSSLPEFTSVFS 194 coho salmon
XP_019715856 118 PHGDLVQiktetaepcfsqnl---------------------------------qvptsscggaleaNMTGLPDFTSAFN 164 tiger tail seah...
XP_030234976 130 PLPQQPHpqqphphpqqqqqqqqahaglaqvktesfssalqphctetsptassgtgpmpmeasaiamTLPGLLEFTSAFS 209 Atlantic cod
Q13887       195 Shqta-------apevNNIFIKQELPTPDlhlsv------------ptqqgHLYQLLNTPDLDmpsstnqtaamdtlnvs 255 human
XP_018584650 169 Qsgg---------tdvDGVFVKQEVSSDIah------------------dsSFFQLLNSEMDVmlpgdlagvnphrsvpv 221 Asian bonytongue
KTG36643     164 Snstsgse-inamddnSGVFVKQEMQGFDipq-----------------dgPLFQLLSSELDIphqadshshphahsvps 225 common carp
XP_026865480 160 Sssgpvtg-vdaddaaGGLFVKQEVPSFElpq-----------------dgHLFQLLSSELDVpiqgisdshahalssqv 221 electric eel
XP_030636521 163 Sgsgnsl---dasetsGGVFVKQELPSFDlpq-----------------dgPLFQLLNSELDMplpghqgdgpdahpapm 222 milkfish
XP_028835512 181 SspgsgtgldasavagAGVYVKQELPTFDlpq-----------------dgPLFQLLSSELDIplhghhsdpapdphslh 243 denticle herring
XP_010864920 190 Ssgdpts----sssssDAVYVKEELSVFDpph-----------------dsSLFQLLSSDLDPalthhhhhgnharhrvg 248 northern pike
XP_031676879 195 Psgggdpt-sdavatgGSVYVKEELGSFDlph-----------------ddSLFQLLSAELDSaplapmhhhgnnahhra 256 coho salmon
XP_019715856 165 Qpgs---------ealPEVFIKQEMSSPFeqqlhq-----------hdggaSLFQLLISGLEHhhgdgmdahhhpnpqqq 224 tiger tail seah...
XP_030234976 210 Qsevgg------ddamSGVFVKQEVPSPFeqqhhhhhhhhhhhnnhhdnsgSLFQLLNSDLDHhhgngvdvqtqqqqqqq 283 Atlantic cod
Q13887       256 msaamaglnth----------------------------------tsavpqtavkqfqgmppctytmpsqflPQQATYFP 301 human
XP_018584650 222 sphvpaisdvh---------------------------------fvgqqtgvrpfcnvhsggyaqpgplvqqAQKATCLP 268 Asian bonytongue
KTG36643     226 qmatfhdlhlatq------------------------------qtaaktycgmsgyplgpghfvhpqgqahsQLKMPYLP 275 common carp
XP_026865480 222 ppfhdlhlaap----------------------------------qtaakpycgmptagyplgpgqfahgqtQVKVPYLP 267 electric eel
XP_030636521 223 qaqmptfhdlhlaa---------------------------qqtaakpycsmqgqgyqpmpghfiqhqgqsqQVKAPYLP 275 milkfish
XP_028835512 244 ptfhdlhlavqq--------------------------------tgakpycgmdggaafpmpgpysqhqglsQAKAPYLP 291 denticle herring
XP_010864920 249 aglqqhgvsgpapgmqtfhd---------------lavqaqqqqtvktsycsglhgvaggyphthflqqahhQGKAPYLP 313 northern pike
XP_031676879 257 gqhhggsgpspimhtfhdlhlaa----------qaqqqhqqlqsakasycgglhnvggayphphflqqpqhhQAKAPYLP 326 coho salmon
XP_019715856 225 qqhlphssavhtpf----------------------------rstqpdqtakssfcggppysrphahffqqqQQQAAYLP 276 tiger tail seah...
XP_030234976 284 qhhhrlhqtqsagplsvhtsfhdmsvpsstsqqqqqqqqqqqqqastakpnycgltggayvhapaahpqfqpQQQVPYLP 363 Atlantic cod
Q13887       302 PSPPSSEPGSPDRQAEMlqNLTPPPSYAATIASKLAIHNPnlpt------------------------------------ 345 human
XP_018584650 269 PSPPVSEPGSPNRQKELahKLSPPPSYAATIASKLGVHSPglp------------------------------------- 311 Asian bonytongue
KTG36643     276 PSPPTSEPGSPDRQKEMlhNLTPPPSYAATIASKMAVPAPshptp----------------------------------- 320 common carp
XP_026865480 268 PSPPTSEPGSPDRQKELrhNLTPPPSYAATIASKMAVRTPshpapp---------------------------------- 313 electric eel
XP_030636521 276 PSPPSSEPGSPDRQKELlqNLTPPPSYAASIASKMAAQVPchna------------------------------------ 319 milkfish
XP_028835512 292 PSPPSSEPGSPDRQKELlqNLSPPPSYAASIASKLATHGPghpnvv---------------------------------- 337 denticle herring
XP_010864920 314 PSPPSSEPGSPDRQKDLlqNLSPPPSYAATIASKLGVSAFprgvsqpp-------------------------------- 361 northern pike
XP_031676879 327 PSPPSSEPSSPDRQKDLlqNLSPPPSYAATIASKLGVSVSpslsptgvarppa------------------------ssl 382 coho salmon
XP_019715856 277 PSPPSSEPGSPDRQKELlhTMSPPPSYAATIASKLAGGAPglapetlalplsgaa--------------------pavpg 336 tiger tail seah...
XP_030234976 364 PSPPSSEPGSPDRQKELlhTMSPPPSYAATIASKMASGSPpilctspgtmalplgagptqapgpaagltssgpdtvlglg 443 Atlantic cod
Q13887       346 ------tlpVNSQNIQPVRYNRRSNPDLEKR 370 human
XP_018584650 312 ------aalPVSPQMVPVRYNRRTNPDLEKR 336 Asian bonytongue
KTG36643     321 ----tstraPATIGSMPVRYNRRTNPDLEKR 347 common carp
XP_026865480 314 ---ptrapvNAGVSGMPVRYNRRTNPDLEKR 341 electric eel
XP_030636521 320 -----paavRPPAPAMPVRYNRRTNPDLEKR 345 milkfish
XP_028835512 338 ----psqstRNPSHAMPVRYNRRTNPDLEKR 364 denticle herring
XP_010864920 362 --asgltqaPASSQPMPIRYNRRTNPDLEKR 390 northern pike
XP_031676879 383 tpapgsgpaPSLNQSMQVRYNRRTNPDLEKR 413 coho salmon
XP_019715856 337 qaaplphapAATQSLTAARYNRRNNPDLEKR 367 tiger tail seahorse
XP_030234976 444 taetgtspsSGSSSTMPIRYNRRNNPDLEKR 474 Atlantic cod
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