Conserved Protein Domain Family
7tmA_OR4D-like

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cd15936: 7tmA_OR4D-like 
olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.
Statistics
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PSSM-Id: 320602
Aligned: 16 rows
Threshold Bit Score: 411.728
Created: 12-Dec-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                #  ##           ###### #
Q8NGE8        25 QVLFTFLFLVYMTTLMGNFLIMVTVTCESHLhtPMYFLLRNLSILDICFSSITAPKVLIDLLseTKTISFsGCVTQMFFF 104 human
XP_005284287  26 RFLFVVFFIVYMMTWLGNLTIIITVITDHQLhtPMYFLLGNLAFIDLSESSVTVPKMLWDLLskQETITFgGCMSQMFFF 105 western painted...
P58180        25 RFLFLMFLFVYITTVMGNILIIITVTSDSQLhtPMYFLLRNLAVLDLCFSSVTAPKMLVDLLseKKTISYqGCMGQIFFF 104 human
Q8NGJ1        25 FFLFVVFFAVYVATVLGNALIVVTITCESRLhtPMYFLLRNKSVLDIVFSSITVPKFLVDLLsdRKTISYnDCMAQIFFF 104 human
XP_006037773  25 PVFFLLFFLLYLITILGNFLIMATTASDPRLqtPLYLFLRNLSFLDFCYISVTAPKMLAGFLlpPQTISYgGCVAQIFFF 104 Chinese alligator
Q8NGN0        25 FVFFTVFSAVYFMTVVGNLLIVVIVTSDPHLhtTMYFLLGNLSFLDFCYSSITAPRMLVDLLsgNPTISFgGCLTQLFFF 104 human
XP_001516775  25 GFLFLVFLLAYLAALLGNLLIIVTLTCEPRLhtPMYFLLLNLASLDICFSTITTPKMLADLLseTKIISYgGCMAQIFFF 104 platypus
XP_006259157  26 YLLFLVFFLVYLMTWLSNLTIIIVVITNSHLhiPMYFFLANLAFIDINDSSVTAVKLLWDLAsqTKTISFtWCIIQIFLF 105 American alligator
XP_006036485  25 FLLFFIFLFVYMMTWIGNFTIIATVIFDLHLhtPMYFLLANLAFADVTYGSSTVPLMLSGLLtqGMIVSFaSCFSQMFFS 104 Chinese alligator
XP_007442987  26 LVLFSIFLTLYIITWLGNLAIILTVISTHSLhvPMYFFLANLAVIDISDCTVTALKMLWDLIshTNSISYnWCITQVFFF 105 Burmese python
Feature 1        #  #                                            # #####                         
Q8NGE8       105 HLLGGADVFSLSVMAFDRYIAISKPLhYMTIMsRGRCTGLIVASWVGGFVHSIAQISLLlpLPFCGPNVLDTFYCDVPQV 184 human
XP_005284287 106 HFTRGAVVFFLMVMALDWYVAIHKPLhYLSIMnRGLCVGLVVGAWLGGFVHSIVQVALTiqLPFCGPNTLDNFYCDVPQV 185 western painted...
P58180       105 HFLGGAMVFFLSVMAFDRLIAISRPLrYVTVMnTQLWVGLVVATWVGGFVHSIVQLALMlpLPFCGPNILDNFYCDVPQV 184 human
Q8NGJ1       105 HFAGGADIFFLSVMAYDRYLAIAKPLhYVTMMrKEVWVALVVASWVSGGLHSIIQVILMlpFPFCGPNTLDAFYCYVLQV 184 human
XP_006037773 105 HFSGGTEIFLLTVMAYDRYVAIFHPLrYVTVMsRGVCVGLETASWVGGFIHSIVQVAIIlqLPFCGPNKLDNFYCDVPQV 184 Chinese alligator
Q8NGN0       105 HFIGGIKIFLLTVMAYDRYIAISQPLhYTLIMnQTVCALLMAASWVGGFIHSIVQIALTiqLPFCGPDKLDNFYCDVPQL 184 human
XP_001516775 105 HLLGGADVFFLSVMAYDRYVAISRPLhYMAVMtWRVCKGLVVTSWIIGLVHSVLQLALLlpLPFCGPNVLDNFYCDIPQV 184 platypus
XP_006259157 106 HFTGGAGVFLLVVMAVDRYVVIHKPLhYLTIMnQGVCTGLVIGSWLGGFAHSIVQTALIiqLPFCGPNILDNFYCDVPQV 185 American alligator
XP_006036485 105 HLTGGAEVFFLGVMAIDRYIAIHKPLhYTTIMnQSVCMGLVAGAWLGGFIHSIIQIILLvqLPFCGPNKLDNFYCDVPQV 184 Chinese alligator
XP_007442987 106 HCTGGAVVFFLVVMAIDRYIAIYKPLqYLLIMnPGVCTGLVAGAWLGGFAHSIVQVALIiqLPFCGPNILDNFYCDVPQV 185 Burmese python
Feature 1                  #  ### ### ##                                           #  ## ##  #   
Q8NGE8       185 LKLACtdtftLELLMISNNGLVSWFVFFFLLISYTVILMMLrshtgEGRRKAISTCTSHITVVTLHFVPCIYVYARPftA 264 human
XP_005284287 186 IKLACtdtymVELLMVSNSGLLTIIIFIILIVSYTVILVKIrthvpEGKHKALSTCGAQVVVVSIHFMPCIFIYARPfrK 265 western painted...
P58180       185 LRLACtdtslLEFLKISNSGLLDVVWFFLLLMSYLFILVMLrshpgEARRKAASTCTTHIIVVSMIFVPSIYLYARPftP 264 human
Q8NGJ1       185 VKLACtdtfaLELFMISNNGLVTLLWFLLLLGSYTVILVMLrshsgEGRNKALSTCTSHMLVVTLHFVPCVYIYCRPfmT 264 human
XP_006037773 185 VKLACtntftAELLMVSNSGLVTLLCFVVLLISYSVLLAKLrtrssEGWSKALSTCASHITVVTLTFGPCIYIYAHPfcT 264 Chinese alligator
Q8NGN0       185 IKLACtdtfvLELLMVSNNGLVTLMCFLVLLGSYTALLVMLrshsrEGRSKALSTCASHIAVVTLIFVPCIYVYTRPfrT 264 human
XP_001516775 185 LRLACtdtsiLELLMITNSGMLSLIWFILLLASYMIILRMLrsyskEGRRKATSTCTSHIIVVSLHFVPCVYTYARPfdS 264 platypus
XP_006259157 186 IKLACvntylVELLMVSNSGLLLAFIFLILLISYSIILVKIrkhvtDGKHKALSTCAVQIIGKNLIFIPEIFIYDRPfkK 265 American alligator
XP_006036485 185 IKLVCtetflLELLTVSNNGLITTLIFIILMLSYTIILIKIrthitEGKHKAFSTCGAQIVVVCLIFLPSTLIYARPfrT 264 Chinese alligator
XP_007442987 186 IKLACtdtyiIELLMASNSGLLLTLIFCILFGSYIVILVKIrmhvtERKRKAFSTCLAQIIVMSLHFIPAMFIYDRPfqI 265 Burmese python
Feature 1        ## ###  #  ##              
Q8NGE8       265 LPTDTAISVTFTVISPLLNPIIYTLRN 291 human
XP_005284287 266 FSMDKAVSALYTVITPMLNPMIYMLRN 292 western painted turtle
P58180       265 FPMDKLVSIGHTVMTPMLNPMIYTLRN 291 human
Q8NGJ1       265 LPMDTTISINNTVITPMLNPIIYSLRN 291 human
XP_006037773 265 FPMDKAVSVIYTIIAPMLNPVIYTLRN 291 Chinese alligator
Q8NGN0       265 FPMDKAVSVLYTIVTPMLNPAIYTLRN 291 human
XP_001516775 265 FSPDKVVSVALTVLSPVLNPVIYTLRN 291 platypus
XP_006259157 266 LSVDKIVSVTYALITPMLNPIIYTLRN 292 American alligator
XP_006036485 265 FPWDKSVSVLYTGVTPMLSPLIYTLRN 291 Chinese alligator
XP_007442987 266 SPGDKITSLLYTAITPVLNPIIFTLRN 292 Burmese python

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