Conserved Protein Domain Family
nusB

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PRK00202: nusB 
transcription antitermination factor NusB
Links
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Statistics
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PSSM-Id: 234686
Aligned: 580 rows
Threshold Bit Score: 107.186
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
300854298   1 MNRKKSRELIMKLLFEMSINREdfrsvlaNLEDnLEKKI--ESKE------TDGaeevysenidklknVD---------- 62 
15604037   26 NKKSIARIAAVQALYQNILQNNyd---myDIMQnILACY--HSNNs----------------------IDlpknf-kisl 77 
51473361   26 NKKSIARIAAVQALYQNILQNNy------DMYDiMQNILacYHSNs----------------------IDlpknf-kisl 76 
157825345   7 NKKSIARIAAVQAIYQNILQNNd------DMDDiMQNVLsfYRNDssitnlTGN--------------LKis-------l 59 
157803349  29 NKKSIARIAAVQAMYQHILQDNq------DMEYiLQNVLsfYQNNnsitdlSEN--------------LKis-------l 81 
67459511    7 NKKSIARIAAVQAIYQNILQNNd------DMDDiMQNVLsfYQNNnsttalPEN--------------LKis-------l 59 
91205934    7 NKKSIARIAAIQAIYQHMLRNNd------NIDDiIENVLsfy------rndTSM--------------TDspik---isl 57 
157826705   7 NKKSIARIAAIQAIYQHMLRNNdn---idDIIEnVLSFYr-NDTSmtdspiKIS--------------LT---------- 58 
238650352   7 NKKSIARIAAVQAIYQNILQNNd------DMDDiMQNVLs----------fYQNnnsitdlpenlkisLS---------- 60 
148284859   9 NTKTITRIASIQGVYSYQILDSe-----pTIDSiIDFIItyYKDKs----sLED--------------LEldsaipcfkl 65 
300854298  63 -MEYVKRVVKGIEENKDSLDKEIEKYLRN-WTLNRLPKVDAAILRICTYEFLYEQDIPEKVSINEAIELAKKYSSEKSAP 140
15604037   78 sISHFKMLVKSVFENINKLDEIIDNHLTNaKDSVHMPILLRALLRVSICELLFCSTTPAKVVINEYTDIANDLLNEHEIG 157
51473361   77 sISHFKMLVKSVFENINKLDEIIDNHLTNdKDPVHMPILLRALLRVSICELLFCSTTPAKVVINEYTDIANDLLNEHEIG 156
157825345  60 sISHFKILVKSVFENINKLDEIIDNHLTNdKDPAHMPILLRALLRAGIYELLFYPTTPAKVVINEYTDIANDMLNGYEIG 139
157803349  82 sISHFKMLVKSVFENFNKLDEMIDNHLTNdKDPAHMPILLRALFRVSICELLFCHTTPAKVVINEYTDIANDMLNEHEIG 161
67459511   60 sISHFKMLVKSVFENINKLDEIIDNHLTNdKDPAHMPILLRALLRVSICELLFCPTTPAKVVINEYTDIANDMLNEHEIG 139
91205934   58 tISHFKMLVKLVFENIDKIDEIISNHLVNdKNQNHIPILLQALLRSGICELLFFPDIPTKVIINEYTDIANDMLNDHEIG 137
157826705  59 -ISHFKMLVKLVFENIDKIDEIISNHLVNdKNQNHIPILLQALLRSGICELLFFPDIPTKVIINEYTDIANDMLNDHEIG 137
238650352  61 -ISHFKMLVKSVFENIHKLDEIIDNHLTNdKDPAHMPILLRALLRVSICELLFCPTTPAKVVINEYTDIANDMLNEHEIG 139
148284859  66 rTNYLTKLVNETIDNLETIDMIISSYLADnWQIKDLHLILLSILRVATCELKFFTSTPYKVVINEFTNIASDFVKESEIG 145
300854298 141 FINGVLGNMIKDKSISKQ 158
15604037  158 FVNSILDKIAQENNKIS- 174
51473361  157 FVNSILDKIAQENNKIS- 173
157825345 140 FVNSVLDTIAKEKNKIS- 156
157803349 162 FVNSVLDKIAKENKKIL- 178
67459511  140 FVNSILDKIAQENNKIS- 156
91205934  138 FVNSILDKIAHENKRFYD 155
157826705 138 FVNSILDKIAHENKRFYD 155
238650352 140 FVNSVLDKIAKEHTRLI- 156
148284859 146 FVNSLLEKISFNVRTNF- 162
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