Conserved Protein Domain Family
FDH-beta

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TIGR01582: FDH-beta 
formate dehydrogenase, beta subunit, Fe-S containing
This model represents the beta subunit of the gamma-proteobacterial formate dehydrogenase. This subunit contains four 4Fe-4S clusters and is involved in transmitting electrons from the alpha subunit (TIGR01553) at the periplasmic space to the gamma subunit which spans the cytoplasmic membrane. In addition to the gamma proteobacteria, a sequence from Aquifex aolicus falls within the scope of this model. This appears to be the case for the alpha, gamma and epsilon (accessory protein TIGR01562) chains as well. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport]
Statistics
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PSSM-Id: 273705
Aligned: 3 rows
Threshold Bit Score: 519.466
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P44450        12 DVIKISATSGltpAPQARDHKVEIAKLIDVSTCIGCKACQVGCSEWNDIRSDINa------QCVGVYDNPVDLDAKAWTV 85  Haemophilus inf...
WP_010967001  25 DLVRRSATTE---LPPPERQLTPVAKLIDVSKCIGCKACQSACVEWNDTHPGIG-------ENVGYYTNPHDLTEDMFTL 94  Sinorhizobium m...
WP_010880648  13 GIKRLSASKEp--DTSVKTYP-ELAILVDVSSCIGCKACEAACQQWHDTTPPILspeevikRKIAGYQTHPDLLPETFML 89  Aquifex aeolicus
P44450        86 MRFNEVE--ENDRLEWLIRKDGCMHCTEPGCLKACPAPGAIIQYANGIVDFQSDKCIGCGYCIAGCPFNIPRMNPEDNRV 163 Haemophilus inf...
WP_010967001  95 MRFTEWVnpETDNLEWLIRKDGCMHCADPGCLKACPAPGAIVQYTNGIVDFVHENCIGCGYCIKGCPFNIPRISKVDHRA 174 Sinorhizobium m...
WP_010880648  90 MKFKEGE--TSRGFTWFITKYQCMHCREPGCLIACPSPGAVIQYQNGVVDFDHSKCIGCKMCLVGCPFDIPRYDK-NNKP 166 Aquifex aeolicus
P44450       164 YKCTLCVDRVSVGQEPACVKTCPTGAIRFGSKEEMKIYAEQRVADLKSRGYENAGLYDPPGVGGTHVMYVLHHADKPELY 243 Haemophilus inf...
WP_010967001 175 YKCTLCSDRVAVGQGPACAKACPTQAIVFGTKEDMKKHAEHRIADLKSRGYTNAGLYDPPGVGGTHVMYVLHHSDKPHIY 254 Sinorhizobium m...
WP_010880648 167 WKCNFCIDRVSAGLEPACVKTCPTNCLSFGFKEDMIERGKKIVERLKERGYPNATLYDPPGVGGTGYIYVLPHGDHVKDY 246 Aquifex aeolicus
P44450       244 NGLPKDPQIDLSVTLWKDVLKPVAAVAMGGLALAEVAHYLTVGPNVEEDVEDH 296 Haemophilus influenzae Rd KW20
WP_010967001 255 SDLPDDPKISAVVQAWKGVTKYTGLAAMGLVAAGAILHGVFGRANRVQPEDEE 307 Sinorhizobium meliloti
WP_010880648 247 Q-LPENPRVDASIGLWKGPLKTIGSIAFWGTLLGVFLQLILWGPIKVLGGKEE 298 Aquifex aeolicus
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