6WW7,6Z3W


Conserved Protein Domain Family
UPF0172

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pfam03665: UPF0172 
Uncharacterized protein family (UPF0172)
In Chlamydomonas reinhardtii the protein TLA1 (truncated light-harvesting chlorophyll antenna size) apparently regulates genes that define the chlorophyll-a antenna size in the photosynthetic apparatus. This family was formerly known as UPF0172.
Statistics
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PSSM-Id: 461011
Aligned: 81 rows
Threshold Bit Score: 137.366
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6WW7_H                          4 VKLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKehlplggpgahhTLFVDCIPLFHGTLALAPMLEVALTLIDSWCK 83 
Q55FM0                          5 ISITTEALSKAHLHSFKHHASSVNGILLGKADKNS-------------ILITDIIPLFH-TQTLLPMFEVAMIQIEKYCR 70  Dictyostelium discoideum...
EFA75467                        4 ITISLQSFLKIHSHSFKYCTNAVNGILLGYVEKSV-------------LNITDVIPLSH-SMTLLPMFEVALIQIEAYCK 69 
XP_004360071                    7 IEVTIEAFKKIHSHSFKYLESAVNGILLGTVQKDSS------------IIVNDIIPLFH-NGTLLPMFEVAMIQIEEYCK 73 
WGS:AAGF:cds.TTHERM_00295640A   8 QAIELLAYKKAYLHALKYVKDDVIGVLTGKIENGQ-------------ITVEDAYPLFH-SRVVSPTLETAFELIEGALK 73 
Q8IHW7                          6 ITIDDGAYAKIFMHSIKYSCDDVCGILIGKYLSSNEkk--------kkCLITNYIPLFH-THILSPYLNLAFTLVENYYK 76  Plasmodium falciparum 3D7...
XP_001615511                    6 ISIENAAYAKMFMHGLKNSYDDVCGILIGKYSDVEKkk--------qrCVITDSIPLFH-THILSPFLNLAFTLVENHYK 76 
XP_001836039                    7 LTVASKAYLKIYFHAAKHLHQTINGVLLGNQTGGK-------------IVVEDAIPLLHHWTSLSPMMEIGLDLAEQYAA 73 
XP_007329869                    5 YTITGPAYIKLFFHLAKHPHQRVNGVLIGKELSEGV------------VEATDAIPLLHHWTSLSPMMEIGLDLAGQYAE 72 
EFI99073                        4 YTFSDDAYLKLFFHCAKYPHRAVNGVLLGTEAGDE-------------VQITDAVPLLHHWTHLSPMMEIGLDLAATYAA 70 
6WW7_H                         84 DHSYVIAGYYQANERVK-DASPNQ-VAEK-VASRIAEGFS--DTALIM---VDNTKFTM----DCVA--P-----TI-HV 143
Q55FM0                         71 DNNIDMVGYYHSNQCIAnELEPEP-IAKK-IADRLNNELN--NMCFLMiskIEVnr-----------------psGLvSI 129 Dictyostelium discoideum...
EFA75467                       70 INQIEMIGYYYANENTF-EKDLEP-IAKR-VADKLYNELN--SMCFLGvteINEdn-----------------plGLiPI 127
XP_004360071                   74 VNQIDMVGYYHITDNLS-EKEVDP-MAKK-ILEKLSNELH--TFCFITiveLDNdn-----------------qsGLiSL 131
WGS:AAGF:cds.TTHERM_00295640A  74 KKKQIIVGLYEALSHPYqAKYLSE-ISTR-ILEKIQKNLSkqPIALRI---YDE---DKqdqqEEIQeyHyltceGYkFD 145
Q8IHW7                         77 DKDERIIGYFHISSDDSkNSDIENiKVCElISEKLIKNYN--DAFVCL---LEFSKY------------VndednCLnIF 139 Plasmodium falciparum 3D7...
XP_001615511                   77 GKEERIIGYYHISVEDSkNDDIKNvKVCElVANKLVKNYS--DAMICL---VQLSKL------------EsddanCLnVF 139
XP_001836039                   74 EANLKIVGYYQGRAAVG-DVGLGP-VGEK-ITQRIKEKFA--DAFALT---LDGEDFgt--------------ekAAlVV 131
XP_007329869                   73 SAGLKVVGYYQACERPE-DTTLFP-VGEK-IASRIKQGFN--HAIAFV---LDASQIdg--------------tsAAlVP 130
EFI99073                       71 SVGMKLVGYYQACERLD-DTALTP-VGEK-VARRIRDSFA--NAAAFV---IDGEQIgt--------------gsAAlVP 128
6WW7_H                        144 YEHHE---NRWR---------CRDPHHdyce-dwpEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEI 202
Q55FM0                        130 DKVG----SDWLknrk--tliTIDTTSns-----eDINEILKRNLQNIKESQIYDFEEYLSNPTRDWLNKSL 190 Dictyo...
EFA75467                      128 GRNNE---NQWVkssi--kqlRLTGDKqs----psYPKSMIQAHVKDGKLTQFNDFEDYLNNPTLDWLNRPS 190
XP_004360071                  132 SSNGNslaKQQDvkvv--gqpSFD-----------TLKQTLKQILTEHKETKLNDFEDYLSNPTLDWLNKPL 190
WGS:AAGF:cds.TTHERM_00295640A 146 LKDSKnidANYEkiqe--lnpQNGF----------AKFEIIKNDISQNKHRFIVDFDAHFEDISLDFTNSFL 205
Q8IHW7                        140 MKNDK---SNWEkgnv--visN-------------KNKEFLKKNISNQHYLNIYDFDDHLNSMKCDFMNPDL 193 Plasmo...
XP_001615511                  140 MQDDAt--EEWKncdv--evtR-------------NNKDFLKMSLSNNEYLNLHDFDDHLNCINHDFMNSNL 194
XP_001836039                  132 WTYTE---NQWRrigssgaspPFTSGSsiqldspdLPQKALSYVRDKSLHLQFGDFDDHLEDVKIDWIHNRE 200
XP_007329869                  131 YVPAAp-nPNWKpass--spqPFTVDSpyqlsppnLASRALALVRDEKLHLKFGDFDDHLEDVAIDWLRNKA 199
EFI99073                      129 YTFNTs-tSSWTrs-----ssSFTEGSpyrltstdIPLRAVKLVRQEQREKKFGDFDDHLEDVTIDWLRNKA 194
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