4JLV


Conserved Protein Domain Family
eps_fam

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TIGR01007: eps_fam 
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capsular exopolysaccharide family
This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Statistics
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PSSM-Id: 273392
Aligned: 9 rows
Threshold Bit Score: 276.626
Created: 7-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4JLV_A    64 EKFRGIRSNIMFSKAngE--VKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMRKPTQNYIFNEQN-NNGLSS 140 Staphylococcus aureus
AAC46085  23 EKFRGIRSNIMFSKA--NgeVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDMRKPTQNYIFNEQN-NNGLSS 99  Staphylococcus aureus
AAC45229  26 EQYRTIRTTIDFKMA--DqgIKSFLVTSSETDEGKTTVSANIAVAFAQQGKKVLLIDGDLRKPTVNITFKVQN-RVGLTN 102 Lactococcus lactis ...
AAC38747  19 EYYNALCTNLQLSGD--G--LKVFSITSVKIGEGKSTTSANIAWAFARAGYKTLLIDGDIRNSVMLGVFKARNkITGLTE 94  Streptococcus pneum...
AAC78666  19 EYYNALCTNLQLSGD--D--LKVFSITSVKAGEGKTTTSTNIAWAFARAGYKTLLIDADMRNSVMSGVFKSRErITGLTE 94  Streptococcus pneum...
Q54520    19 EYYNALCTNIQLSGD--K--LKVISVTSVNPGEGKTTTSVNIARSFARAGYKTLLIDGDTRNSVMSGFFKSREkITGLTE 94  Streptococcus pneum...
Q04663    19 EYFNAIRTNIQFSGK--E--NKILAITSVREGEGKSTTSTSLALSLAQAGFKTLLIDADTRNSVMSGTFKATGtIKGLTN 94  Streptococcus agala...
AAC31162  19 EYYNTIRTNIQFSGA--Q--MKVIAISSVEAREGKSTTSVNLAISFASVGLRTLLIDADTRNSVLSGTFKSNEpYKGLSN 94  Streptococcus therm...
P39851    23 EKFRGIRSNIMFSNA--EneIKSLLITSEKSASGKSILSANIAVTYAQAGYKTLIIDGDMRKPTQHYIFDLPN-NSGLSN 99  Staphylococcus aureus
4JLV_A   141 LIIGRTTMSEAITSTEI-ENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSL 219 Staphylococcus aureus
AAC46085 100 LIIGRTTMSEAITSTEI-ENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRYDIIIVDTPPVNTVTDAQLYARAIKDSL 178 Staphylococcus aureus
AAC45229 103 ILMHQSSIEDAIQGTRLsENLTIITSGPIPPNPSELLASSAMKNLIDSVSDFFDVVLIDIPPLSAVTDAQILSSYVGGVV 182 Lactococcus lactis ...
AAC38747  95 FLSGTTDLSQGLCDTNI-ENLFVIQAGSVSPNPTALLQSKNFTTMLETLRKYFDYIIVDTAPVGVVIDAAIITRNCDASI 173 Streptococcus pneum...
AAC78666  95 FLSGTTDLSQGLCDTNI-ENLFVIQAGSVSPNPTALLQSKNFTTMLETLRKYFDYIVVDTAPVGVVIDAAIIMQKCDASI 173 Streptococcus pneum...
Q54520    95 FLSGTADLSHGLCDTNI-ENLFVVQSGTVSPNPTALLQSKNFNDMIETLRKYFDYIIVDTAPIGIVIDAAIITQKCDASI 173 Streptococcus pneum...
Q04663    95 YLSGNADLGDIICETNV-PRLMVVPSGKVPPNPTALLQNAYFNKMIEAIKNIFDYIIIDTPPIGLVVDAAIIANACDGFI 173 Streptococcus agala...
AAC31162  95 FLSGNADLNETICQTDI-SGLDVIASGPVPPNPTSLLQNDNFRHLMEVARSRYDYVIIDTPPIGMFIDAAIIAHQADASL 173 Streptococcus therm...
P39851   100 LIINKTTYSDSIKETRV-ENLNVLTAGPTPPNPSELIASSKFATIFNELLNHYDFIVIDTPPINTVTDAQVYARIVKNCV 178 Staphylococcus aureus
4JLV_A   220 LVIDNEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKSSS-YYHYYG 267 Staphylococcus aureus
AAC46085 179 LVIDSEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKSSS-YYHYYG 226 Staphylococcus aureus
AAC45229 183 LVVRAYETKKESLAKTKKKLEQVNANILGVVLHGVDSSDSPS-YY-YYG 229 Lactococcus lactis subsp. cremoris
AAC38747 174 LVTEAGEINRRDIQKAKEQLEHTGKPFLGIVLNKFDTSVDKYgSYGNYG 222 Streptococcus pneumoniae
AAC78666 174 LVTKAGETKRRDLQKAKEQLEQTGKSCLGVVLNKLDTSVEKYgSYGSYG 222 Streptococcus pneumoniae
Q54520   174 LVTATGEVNKRDVQKAKQQLEQTGKLFLGVVFNKLDISVDKYgVYGFYG 222 Streptococcus pneumoniae
Q04663   174 LVTQAGRIKRNYVEKAKEQMEQSGSKFLGIILNKVNESVATYgDYGDYG 222 Streptococcus agalactiae NEM316
AAC31162 174 LVTAAGKIKRRFVTKAVEQLEQSGSQFLGVVLNKVDMTVDKYgSYGSYG 222 Streptococcus thermophilus
P39851   179 LVIDAEKNNKSEVKKAKGLLTKAGGKVLGAVLNKMPIDKNSS-YYYYYG 226 Staphylococcus aureus
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