Conserved Protein Domain Family
typeII_sec_gspC
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TIGR01713: typeII_sec_gspC 
type II secretion system protein C
This model represents GspC, protein C of the main terminal branch of the general secretion pathway, also called type II secretion. This system transports folded proteins across the bacterial outer membrane and is widely distributed in Gram-negative pathogens. [Protein fate, Protein and peptide secretion and trafficking]
Links
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Statistics
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PSSM-Id: 273770
Aligned: 5 rows
Threshold Bit Score: 288.261
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P45777        29 EGLTLLLLVASAWTLGKMVWVVSAEQTPVP--TWSPTLSGLKAERQPldiSVLQKGELFGVFtEPKeAPVVEQPVVVDAP 106 Vibrio cholerae...
P15643        27 HIVTSIILFFICQQLAQLTWKIILPVNFTDnaLSSADMTSPAAPSAE---TALPRFTLFGLA-EKT-SASAPGGNLDQAP 101 Klebsiella pneu...
P31698        16 RILFYLLMLLFCQQLAMIFWRVGLP---DNspVASVQITPAQARQQP---VTLNDFTLFGVSpEKNrSGALDASQMSNLP 89  Erwinia chrysan...
P45757        16 DAAINILIIFIS--IGSIIFNVN---YFHTtiVKNGQIINQPTNAFQ---SDFSLAALWRn--ENHaGVKDANPVAVNQE 85  Escherichia col...
WP_010880954   7 LSLAFTLSVFLSVFSLYYLFNRSLDINFVP--KVKKEESVNLANLQG------KLKEIFN----YSvQEVKTSKPSVSSA 74  Aquifex aeolicus

P45777       107 KTRLSLVLSGVVASNDAQKSLAVIANRGVQATYGINEVIEGTQ-AKLKAVMPDRVIISNSGRDETLMLEGLDYTAPatas 185 Vibrio cholerae...
P15643       102 VSALRLRVTGLLASTDPSRAIAIMMKGNQQVSLGIGDNTPGGE-AKIIAISPDRLIVNYRGRNEAIPLFNDPPAVG---- 176 Klebsiella pneu...
P31698        90 PSTLNLSLTGVMVGDDTARSIAIISKDNEQFSRGVNEEVPGYN-AKIVSIRPDKVVLQYQGRYEVLGLYNQE-------- 160 Erwinia chrysan...
P45757        86 TPKLSIALNGIVLTSNDETSFVLINEGSEQKRYSLNEALESAPgTFIRKINKTSVVFETHGHYEKVTLHP---------- 155 Escherichia col...
WP_010880954  75 VSPPSFKVKGIIIS-ERIRG-VILEEGSKDVFLSEGQSFKGYK---LAKVENDRVIFEKNGVEFPLEFKVTKGEKSltq- 148 Aquifex aeolicus

P45777       186 vsnpprprpNQPnavpqFEDKVDAIREAIARNP-QEIFQYVRLSQVKRDDKVLGYRVSPGKDPVLFESIGLQDGDMAVAL 264 Vibrio cholerae...
P15643       177 ---------KNS-----AAPPARHLAQELRAQP-QNILHYLNISPVMVNDKLSGYRLNPGKDPALFRQSGLRENDLAIAL 241 Klebsiella pneu...
P31698       161 ---------ENSa----DGVSGAQLNEQLQQRAsTTMSDYVSFSPVMNDNKLHGYRLNPGPKSDSFYRVGLQDNDMAVAL 227 Erwinia chrysan...
P45757       156 --------------------GLPDIIKQPDSESqNVLADYIIATPIRDGEQIYGLRLNPRKGLNAFTTSLLQPGDIALRI 215 Escherichia col...
WP_010880954 149 -------vnpTLsslpsEIVVSRREILELTKDP-AKMFTQIRLVPYIKNGKTEGFIFEWVKPGSLFYKLGLRRGDILVSI 220 Aquifex aeolicus

P45777       265 NGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 305 Vibrio cholerae O1 biovar El Tor str. N16961
P15643       242 NGLDLRDKEQARQVLAQLPELTEITLTVERDGQKNDIYLAL 282 Klebsiella pneumoniae
P31698       228 NGLDLRDEEQAKKAMERMADVHNFTLTVERDGQRQDIYMEF 268 Erwinia chrysanthemi
P45757       216 NNLSLTHPDEVSQALSLLLTQQSAQFTIRRNGVPRLINVSV 256 Escherichia coli K-12
WP_010880954 221 NNTTIRSGEDAFRILQMIRNEPNLKVELIRRGKREEINVRI 261 Aquifex aeolicus
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