6VLI


Conserved Protein Domain Family
Phage_CP76

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pfam06892: Phage_CP76 
Phage regulatory protein CII (CP76)
This family consists of several phage regulatory protein CII (CP76) sequences which are thought to be DNA binding proteins which are involved in the establishment of lysogeny.
Statistics
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PSSM-Id: 462033
Aligned: 92 rows
Threshold Bit Score: 92.3006
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6VLI_A                   30 PHYDEACRAFAQRH------NMAKLAERAGMNVQTLRNKLNPE-QPHQFTPPELWLLTDLTEDSTL------VDGFLAQI 96 
TCU93932                  4 MTFEQAALGTAADYp----gGARGLAAAIGMNGSVLAHKVSLTdRANQLTVPQARTIMLATGDYRM------LHGLAGDL 73 
WP_056664504              9 DVAL-AAYHLAHSFp----gGIAALALRMGVSSNTLTHKVNPNtATHRLTLNEAVDMQVASGNAAI------LHAMAQAL 77  Acid...
EXU79441                 12 DVLD-AALLIAQEVp----gGVPALAQRMGVSANTLQHKLNPNnTTHHLTLKEAMALQVVSGRPYV------LHAMAAGL 80 
PHV10902                  5 PHIVSVAQMIAKNFh----dGIHGLAQAMGKNSAILSHKLSPTfEGNHLSLEEAAFITEATQSHAI------ADALAALI 74 
WP_052170076              9 NQHD-ALYTVARKYp----gGIDALARELDMSANVLRNKLSPTiASHYPSFEEVSLIVECCHKAGVqeahlpLHALLVRH 83  Mass...
WP_073213376              9 NQHD-ALYTVARRYp----gGLEVLAKDIGISVNVLRNKLSPTiASHYPSFEEVSIIVEHCHKAGVadshmpLHAMLARH 83  Mass...
RYY73622                  9 NPHD-ALYKVARAYp----gGIEALAQTMNISVNVLRNKLAPGiSSHYASFEEVSNIISLCQAAGVkdatlpLHALLARH 83 
PXX44817                  9 NQHD-ALYKIARAYp----gGLEALSVRMGVSVNVLRNKLAPGiETHYPSFEELSIIIEFCQDAGVkdahlpLHALLSRH 83 
PRJNA355353:BST96_07665   7 NITT-QVHKVAKAYhkgdkrGMTGLAKALGIKDNTFNNKCDPNmKGHHLNLKEFLQIIKETGELSL------LSDFAQQF 79 
6VLI_A                   97 HCLPCVPVNELAKDk-----LQSYVMRAMSELGELASG----AV--------SDERLTTARKHNMIESVNSGIRMLSLSA 159
TCU93932                 74 DHVCVRVTGLGDSEc-----VGKSISETAREFGEFLTA----VTva-----vADDDVIPNEMRRIDRELTEMIAAANHLR 139
WP_056664504             78 GYVVHK-----ATPdqaggnPTEALVLASVQWADLMRAagepIAkma---adPGQQTTGNEIRRVEYHAQEVHAAVGHLL 149 Acid...
EXU79441                 81 DYICHR-----SRPddaqgdALEAFMRVQQAMGELTAA----AAdal----rgGGDVSQNAKRRVEHFANEAMASMAHLV 147
PHV10902                 75 NRITVALPD--ADVsm--rdLTMVFCRVVQECGDVGRE----LVdaqspasewgeQISPAERKRIDKELTDLISVAAGLR 146
WP_052170076             84 GMAAFVVP---QPEqarqddLSQTVCRVMSDVGAVAEA----VSta-----llDGTVTPVEADLIERKFHAALSALGAWR 151 Mass...
WP_073213376             84 GLAAFVIP---KPElaarddLSQTVCRVMSEVGAVAEA----VSta-----llDGVVTVAEADLIEREFHSALSALGEWR 151 Mass...
RYY73622                 84 NMAAFLVP---EPSlvsnddLSQTVCRVMSQVGDVAEA----VSea-----llDSVITEREADLIEREFQGALAALGEWR 151
PXX44817                 84 GMAAFSIP---EPHeireddLSQTVCRVMSRVGDVAEA----VSta-----llDGVITDAEADLIEKEFQSALTVLGEWR 151
PRJNA355353:BST96_07665  80 NCAVYQTK---DYTntsnieLLDAMVLVDVERGETAAA----IHea------lDGRITAPKVDVIRKEIYQDIQKMMELL 146
6VLI_A                  160 LALHAR 165
TCU93932                140 ALCAAM 145
WP_056664504            150 ATLRGR 155 Acidovorax sp. Leaf160
EXU79441                148 STVAAR 153
PHV10902                147 QRVQAD 152
WP_052170076            152 ARLRQE 157 Massilia sp. JS1662
WP_073213376            152 ARLRLK 157 Massilia sp. CF038
RYY73622                152 ARIRLH 157
PXX44817                152 ARIRAH 157
PRJNA355353:BST96_07665 147 LRIDAI 152
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