Conserved Protein Domain Family
PFLE_PFLC

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TIGR02494: PFLE_PFLC 
glycyl-radical enzyme activating protein
This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.
Statistics
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PSSM-Id: 274163
Aligned: 13 rows
Threshold Bit Score: 392.467
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAG76668      11 IFNIQKYSIYDGDGVRTLIFMKGCNIRCPWCANPEGIRRAYQILFSPDKCLHCGKCAEACPRGihtliadEYGSRFHHID 90  Pectobacterium ...
AAO35529      14 IFNIQRFSVNDGPGLRTTVFLKGCPLSCRWCSNPESQDKNKQLMFNIKNCIECGKCEEICKLK-------AIDFSNPNRI 86  Clostridium tet...
AAN82972      12 IFNIQRYSLHDGPGIRTIPFFKGCPLSCKWCSNPESQRHSPELLFKKNDCIRCGKCIDACPQQ-------ALSTTNAWFI 84  Escherichia col...
AAS96744       6 IYNIQRMSVHDGPGLRTTVFLKGCPLRCLWCSNPESQSAVPQMLFFENLCTGCGKCVEVCPEGaar----ivDGKVIRSI 81  Desulfovibrio v...
AAR35478       7 VFNIQKYSISDGPGIRTTVFLKGCPASCWWCHNPESQAPAPEMTLVEGRCLSCGECARACPHGtag----rgQGRE---- 78  Geobacter sulfu...
AAS97297      13 TFNIQKYSVHDGPGIRTVVFLKGCPLKCRWCSNPESQRKSVELAYNTGRCLTLAKCVRCVEICtag-aisRAEDDTISID 91  Desulfovibrio v...
AAO78062       5 ITNIQRMSIHDGPGIRSTIFLKGCNLRCKWCHNPETWSMKPQLQYIEDKCIHCFSCITVCEYEv------LFIDSNRLSI 78  Bacteroides the...
AAO36006      18 VFNIQKYSIYDGDGIRTLVFFQGCPLRCKWCSNPEGLIKKHRVMFKSNLCVNCGACVSVCPVSihtlsneT---LKHEIN 94  Clostridium tet...
CAF21970       6 VTEIQRFSLQDGPGIRTTIFLKGCPLHCPWCHNPETQDARQEFYYYPARCVGCGRCVAVCPAGtsr-lvhHSDGRTRIEL 84  Azoarcus sp. EbN1
P75794         2 IFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDLLYDARLCL--EGCELCAKAape--vieRALNGLLIHR 77  Escherichia col...
CAD65891      11 IFDVQSFSVHDGPGCRTTVFLNGCPLSCKWCANPESWTVRPHMMFSELSCQYENGCTVCHGKCkngalsfNLDNKPVIDW 90  Peptoclostridiu...
WP_010878947   8 IFRIQRFSIHDGPGIRTTVFLKGCPLRCIWCHNPESQSFSLEVGYRKERCLGYHECLKSCERSaie-------aseGISV 80  Archaeoglobus f...
WP_010875984   6 ITGIQRFSVHDGPGIRTTVFLKGCTLRCPWCCNPENIRGEPEVYFKEEKCIGCLECVKRCs--------fLDKPRD-IFR 76  Methanothermoba...
CAG76668      91 RTVQCTGCRKCEAACPSNALDIVGKDMTVAELMAVIMQDYSFYQSSGGGVTLSGGEVSLQTDFAVALLQACKQKMINTAV 170 Pectobacterium ...
AAO35529      87 DRHKCTHCGECVEVCYPGALVISGEEMTVEEVVKELKKDAIHFRNSNGGITLSGGEPLMQLEFTLELLKACKTMGWHTAM 166 Clostridium tet...
AAN82972      85 NRDRCIQCGKCTEICPTRALEMKGKRMSVTAVMRELEKEENLYRRSGGGITLSGGEPLAQPEFARELLKACKAKGWHTAI 164 Escherichia col...
AAS96744      82 --AKCTHCGLCTASCPSKAREMSGRLMTVEEVMDVVLKDMLFYENSGGGVTFGGGEPTSGGEFFLDLVKAAHEEGIHVTV 159 Desulfovibrio v...
AAR35478      79 --AACLICGRCADACPTGARRLAGTEMTVADVLAALLKDRIFYEESGGGATFSGGEPLCQPGFLKALLAGCRERGIRTAV 156 Geobacter sulfu...
AAS97297      92 RALCNDCEQLCSGACPSNALITYGAHKTVDEVLRAVEQDSLFYARSGGGMTISGGEPFAQPAFTLALLREARRRRVHTAV 171 Desulfovibrio v...
AAO78062      79 HRERCTDCGKCTERCTSGALSWIGKEVDSSDIIHEILQDLIYYQKSGGGITLSGGEPLQQKDFALDILQKCREHRIHTAV 158 Bacteroides the...
AAO36006      95 RNIDCIGCGKCKDACLKSAISIVGEEKTISELLKIVEEDRVFYEMSGGGVTLGGGEVLMQPKAASSLLMACKQEGINTAI 174 Clostridium tet...
CAF21970      85 DRTNCQRCMRCVAACLTEARSIVGQRMSVEDILREALSDSAFYRNSGGGVTISGGEPLYFPEFTRQLAGELHAAGVHVAI 164 Azoarcus sp. EbN1
P75794        78 EKLTPEHLTALTDCCPTQALTVCGEVKSVEEIMTTVLRDKPFYDRSGGGLTLSGGEPFMQPEMAMALLQASHEAGIHTAV 157 Escherichia col...
CAD65891      91 NICKDCESFECVNSCYYNAFKLCAKPYTVDELVQVIKRDSNNWRSN-GGVTFSGGEPLLQHEFLHEVLLKCHEVNVHTAI 169 Peptoclostridiu...
WP_010878947  81 LREKCDGCGKCVEACPSGALEIYGMDVTASHVMEIVERDRVFYKNSGGGVTFSGGEPYFQPDFLLSLLEECRNRGISAAV 160 Archaeoglobus f...
WP_010875984  77 FPEHHE----CAGSCPSAAMGVYGEFTGADDVAEVILRDLDYYSSTGGGVTFSGGEPLLQADGILSVTRRIGE--VPAAV 150 Methanothermoba...
CAG76668     171 ETQGTTSI-SHYDQLAAVTDMFLFDIKHIDTNQHKALFGIGNENIRRNLEHLVELGa--nIVIRMPLVRGYNDSYDAIMG 247 Pectobacterium ...
AAO35529     167 ETTAYTNK-DIINNVMPYLDLALLDIKILNSSKHKEYIGGDNEIILENAKEIVKLVk--dVIIRVPVIPEFNADKESIAD 243 Clostridium tet...
AAN82972     165 ETSGFTTK-AVIDEVFPYVDLALTDIKAIDPEIHERNTGVNNRVILENLLRISFLTk---VVVRIPVIPGVNDNSQEIHN 240 Escherichia col...
AAS96744     160 DTCGFCPE-ERFDRTLALADLFLFDCKHTDPEAHRRLTGQDNTLILRNLRAALASGk--eVHVRMPLIPGMNDDDANLSA 236 Desulfovibrio v...
AAR35478     157 DTGGFAPR-DQFLEVATAADLILYDLKLMDAERHRAVVGLDNRMVLDNLAALGAVHd--tIWIRIPIIPGVNDDRANLEA 233 Geobacter sulfu...
AAS97297     172 ETCGYASW-DDMAAALPFLNYVLYDIKNLDDARHKEATGVSNQRIVENLRALRAEFpgipVLVRTPVIPGFNDNEADIAA 250 Desulfovibrio v...
AAO78062     159 ETNLLTDV-NTLEAFLPWVDLWMCDFKMADDTLHRKWTGHSNVPIIKNLEFLAKQAv--pLTIRTPVIPNVNDSEEAIES 235 Bacteroides the...
AAO36006     175 ETCGYTNL-ETILKVAESVDLFLFDIKHINPDRHFELTGVRNEQILENLQELLRRKy--nVKIRMPLLKDINNSKEEIEA 251 Clostridium tet...
CAF21970     165 ETSCFPKNrETVESLLDVVDLFIVDLKSLDPRKHFEVIGWPLAPILANLEMLFAAGa--nVRIHIPLIPGFNDSPADFDA 242 Azoarcus sp. EbN1
P75794       158 ETCLHVPW-KYIAPSLPYIDLFLADLKHVADAPFKQWTDGNAARVLDNLKKLAAAGk--kIIIRVPLIQGFNADETSVKA 234 Escherichia col...
CAD65891     170 ETSACVSN-EVFNKIFNDIDFAFIDIKHMDREKHKEQTGVYNDLILENISNLANSDwngrLVLRVPVISGFNDSDENISD 248 Peptoclostridiu...
WP_010878947 161 DTSGFTDW-KVIETSMEFADLFLYDLKDYSSERHRRFCGVGNEHILQNLKNLLDAGn--nVVVRIPVVPGYNFS-EDFDS 236 Archaeoglobus f...
WP_010875984 151 ETSLFAPG-EAVEKLKGEVDLFLVDVKILDDAGCREVTGGDPEVFRRNFERISDGs----FTVRFPAVKPYTFNRENIRA 225 Methanothermoba...
CAG76668     248 AIHYVQKLAKrgnVRRIDILPYHQLGRKKYERLGMIY--PIKADPSYNEEELNRLDAFFDEFD 308 Pectobacterium atrosepticum SCRI...
AAO35529     244 IAMFAKNLET---VKEIHLLPYHKLGVNKYKCVGKEYn-MKDEIGIPSDELMLSLKKVVEDFG 302 Clostridium tetani E88
AAN82972     241 IAEFARLMQN---VDTIHLLPYHSFGENKYNLLGRQYp-MG-DTKSIEESQMAELKAMVESLG 298 Escherichia coli CFT073
AAS96744     237 LAALLG--EFg--RDKVEVMPCHAFGWNKYVALGLPA--PDMPQYTP--EQLSAVLDRFAKHG 291 Desulfovibrio vulgaris str. Hild...
AAR35478     234 TAALAAR-TPg--VRQVNLLPYHRTWHGKLRQLGRAG--ADDAIATPSRERMEELVRIFRAAG 291 Geobacter sulfurreducens PCA
AAS97297     251 IAALTRELG-----VSYQLLPYHRLGTQKYHFLDREA--PMGEVTLD-AETMRRLEAVVAQTA 305 Desulfovibrio vulgaris str. Hild...
AAO78062     236 ICRFIR-QLPn--QPAYELLGFHSLGFVKFENLGMKN--PLSNSAFLKKGQLQKLKEILIRYN 293 Bacteroides thetaiotaomicron VPI...
AAO36006     252 TMEFLTPYKDyknFKGIDLLPYHKMGVNKYNQLGIEY--PIKGDPSLNDEELDRIEEWIKKYD 312 Clostridium tetani E88
CAF21970     243 YVDYLGSRAEs--ITGVDLLSFHSYGEGKYAFLGRSDsyQYSGVEEPPAEKTMPLARALKNKG 303 Azoarcus sp. EbN1
P75794       235 ITDFAADELH---VGEIHFLPYHTLGINKYHLLNLPY--DAPEKPLDAPELLDFAQQYACQKG 292 Escherichia coli K-12
CAD65891     249 IISFMHKNn----LVEINLLPFHRLGESKWTQLGKEY--EYSDKGDVDEGHLEELQDIFLDNG 305 Peptoclostridium difficile ATCC ...
WP_010878947 237 YIEILAKLg----CRRIDLLPFHSLAKDKYRWLGREW--LMPEIGDEARSIALAFSEALEAMG 293 Archaeoglobus fulgidus
WP_010875984 226 LIRFLR--ENm--VDHIEVLGIHRLGLEKYRSLNLQM--PDFSAPDDAEIKKLKWLLEKESIG 282 Methanothermobacter thermautotro...
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