Conserved Protein Domain Family
Period_C

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pfam12114: Period_C 
Period protein 2/3C-terminal region
This domain is found in eukaryotes. This domain is typically between 164 to 200 amino acids in length. This domain is found associated with pfam08447.
Statistics
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PSSM-Id: 463464
Aligned: 25 rows
Threshold Bit Score: 107.487
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_014331377 1259 HSDGNSSSCDLLDILLqeQEDAHSGTGSATSGSMg----sGLGSGSASGSGSN-DCQTSASGASGSRTgsSNTSKYFGSI 1333
ETN62980     1552 DDMDESSFSSFYSSFL--KTDN------------------SSTEGGHNGTEKK-----------------DSSEMCWESS 1594
EFN81588      760 SKKVLSPGELFSSCVS--NDGGCSSV--------------VDLLTPVIMKGHR-PTDYNGDESSSSSF---YSSFLYKSS 819 
BAE90912      329 NQDALSGSSDLLELLL--QEDSRSGTGSAASGSL------GSGLGSGSGSGSHeGGSTSASITRSSQS--SHTSKYFGSI 398 
XP_007242118 1149 NQDAMSTSSDLLDLLL--QEDSRSGTGSAASGSGssgtrsSGSGSGSSGSGSN-GCSSSGSGTRSSQS--SHTSKYFGSI 1223
AAI63543     1126 NQDALSTSSDMLDLLL--QEDSRSGTGSSGSGSG----------SGSFASGSN-GCSTSGSGTRS-----SNTSKYFGSI 1187
AHA91697     1176 NQDAMSTSSDLLDLLL--QEDSRSGTGSAASGSGs-----SGSGSGSSGSGSN-GCSTSGSGTRS-----SNTSKYFGSI 1242
Q9I8L4       1070 HQDAHSSSSEMLDQLL--QEDARSGTGSNASGSG------SGESGGSLGSGS--GLGSNGTSTSHTGS--SNSSKYFASN 1137 zebrafish
XP_014342834 1100 NQDNQSTSSELLDLLL--HEDSQSGTGSATSGSR------SAESSGSNGSRSN---RISGSGTES-----SNSLEYFASN 1163
XP_016083745 1108 NSDALSMPSDFLDLLL--NEDVCSGTGSASTGSA------VSAASESLGSGSN-VCDLSRSGTGSSET--SHTSKYFGSV 1176
XP_014331377 1334 DSLEH-----DPKGKGKTRneggsessksaQGEGEHL-IKYVL---------QEPLWLLMANADDKVMMTYQMPSRDIQR 1398
ETN62980     1595 SNNANtghepEDKNRGGCG-----------RGGNSDGmVRPGTgdicrakrrPNPPWLDNVCQTKDLIYRYQINERSLEE 1663
EFN81588      820 DSSCN-------PDQKTCE-----------VSSEEH--TKCHQgm-----rrRDPPWLEGVQLTPELIYEYQMHPKTLNE 874 
BAE90912      399 DSSEA-----EAGA-ARGG-----------AEPGDQV-IKYVL---------QDPIWLLMANADQRVMMTYQVPSRDMTS 451 
XP_007242118 1224 DSSEN-----DHSRKQTAG-----------GDGEAQF-IKCVL---------QDPIWLLMADTDEKVMMTYQLPIRDRET 1277
AAI63543     1188 DSSEN-----DQNHKPASG-----------DLGGEQF-IKFVL---------QDPIWLLMANTDDKIMMTYQIPIKDKDS 1241
AHA91697     1243 DSSEN-----DHGHKQASG-----------DSGEEQF-IKYVL---------QDPIWLVMANTDEKVMMTYQMPKRDRDT 1296
Q9I8L4       1138 DSSDT-----SRKARKSAE-----------AQERERSgFKKHV---------DDPLWSMIKQTPEPVMLTYQISSRDQAQ 1192 zebrafish
XP_014342834 1164 DSSDT-----SQKEKKSSE-----------AKGEDKV-FKKCM---------GSSIWTMIESTPEAVMMTYQIPARDQKT 1217
XP_016083745 1177 DSSEN-----NHKVKMITD-----------KEEREHF-IKYVL---------QDPIWLLMANADETVMMTYQIPSRNLEA 1230
XP_014331377 1399 VLREDKERLRQMQKSQPHFTSEQRRELVEEHPWMRRGGLPAAINVKEC 1446
ETN62980     1664 LLDSDSLALKKIS--QPILVNDQLGQL---YLDLELEGLSAKLSLSEA 1706
EFN81588      875 VLKADMDAMKNFN--QPLLVNDQLGQL---YLDLEVEGFGTELVLEEG 917 
BAE90912      452 VLKQDRERLRAMQRQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMAC 499 
XP_007242118 1278 VLHEDRIALRAMQKHQPRFTDEQKRELSQVHPWIRTGRLPRAINISTC 1325
AAI63543     1242 VLKEDRDALKAAQKHQPHFTEEQKKELTQVHPWIQTGCLPKAINVTSC 1289
AHA91697     1297 VLREDRELMKTAKMQQPHFTEKQKKELSQVHPWIQTGCLPKAINITSC 1344
Q9I8L4       1193 VLQEDREKLILMQPMQPWFTSDQKKELAEVHPWIQQNTVPQEINTQGC 1240 zebrafish
XP_014342834 1218 VLKEDLEKLLAMQTMQPCFTENQKKELAEVHPWILKHVVPKERDMQSC 1265
XP_016083745 1231 VLKEDREKLKRMQKFQPKFTEEQKRELNEVHSWIQKGGLPKAVNVSEC 1278
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