Conserved Protein Domain Family
PRK09047

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PRK09047: PRK09047 
RNA polymerase factor sigma-70; Validated
Statistics
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PSSM-Id: 236367
Aligned: 77 rows
Threshold Bit Score: 191.72
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
114331386   1 MQDEHT-ALDIVQDSMMKLTEkYAHKPPAELPPLFQRILQNKIRDYYRRQKSRSLWvtlfsafmpaSSEKDtDEYSDIPE 79 
213158284  43 TQGQQGiAMDLVQEAFIALHKsYADRSTEEWYPLFYTILNNKLQDWRRKEARRANPfsff---kkvSLDNDdEEIIDIVD 119
169632710  50 TQGQQGiAMDLVQEAFIALHKsYADRSTEEWYPLFYTILNNKLQDWRRKEARRANPfsff---krvSLDNDdEEIIDIVD 126
169795054  50 TQGQQGiAMDLVQEAFIALHKsYADRSTEEWYPLFYTILNNKLQDWRRKEARRANPfsff---kkvSLDNDdEEIIDIVD 126
215482602  43 TQGQQGiAMDLVQEAFIALHKsYADRSTEEWYPLFYTILNNKLQDWRRKEARRANPfsff---kkvSLDNDdEEIIDIVD 119
302039471  29 TGNEDE-ALDLVQDAMLKLAHkYGERAEEEWGPLFHCILQSRIRDWYRRERVRNRVre------ffRVSQDeEEGEDPLE 101
39995827   28 TSDDDE-ALDVVQDAMLGFVRnYARKPEAEWPPLFHRTLQSRIVDWHRRSTLRNRFraw----fgkNDDEDgGDPLDGIP 102
78223809   33 TSDDDE-ALDLVHDAMLAFVNrYAGKPEGEWAPLFHRTLQNRIVDWHRRTGVRNRFrawf---lggESEEE----SDPLE 104
220935317  32 LNDRDA-ALDVVQDAMEKLITrYADRPEFEWQPLFWRILQSRIMDAHRRRSVRNRVvslfgfagngHDEDD--RDMGPDD 108
253996600  33 TGNRDD-ALEIVQDTMLKLVQkYSQHPATEWKALFYSILNTRILDWHRRQSVRNRFrswl---------nwgDDEGEEAE 102
114331386  80 SLSLAQdfdqknNPGTAAEQSQLIELISKALETLPPRQREAFLLRYWEEMDVSETAKIMDCSEGSVKTHCSRATHTLAAI 159
213158284 120 ek--------aiNPADFLDQAVTIEEIQEAIAKLPVRQQQAFMLRAWEGFDTHTTAQIMNCTEGSVKTHYHRAIQGLREY 191
169632710 127 ek--------aiNPADFLDQAVTIEEIQEAIAKLPVRQQQAFMLRAWEGFDTHTTAQIMNCTEGSVKTHYHRAIQGLREY 198
169795054 127 ek--------aiNPADFLDQAVTIEEIQEAIAKLPVRQQQAFMLRAWEGFDTHTTAQIMNCTEGSVKTHYHRAIQGLREY 198
215482602 120 ek--------aiNPADFLDQAVTIEEIQEAIAKLPVRQQQAFMLRAWEGFDTHTTAQIMNCTEGSVKTHYHRAIQGLREY 191
302039471 102 QIADATa----aAPDEEVQRKRACAELEVALRALPLRQQQAFLLRIWEELDVAQTAQAMGCSQGSVKTHLFRALQVLRTR 177
39995827  103 DVNSPD-------PARQLLDRDLGQAIEAALRKLPTRQRQAFLLRNWEGLDTSETAFAMGCSEGSVKTHLSRAVHALRGM 175
78223809  105 NVADLSs----pDPLASLQRHDLGEAIESAVRRLPLRQRQAFLLRAWEGLDTAQTAFAMGCSEGSVKTHYSRAVHTLRDY 180
220935317 109 WADTRTp-----EPDQALSDEHFGNDLERALASLPLRQQQAFLLRVWEGLDTAETAQALGISEGSVKTHVHRAMAALRQR 183
253996600 103 DLLAQHpgngghAPDVKLQDSQFMTSLNVALSALPLRQQQVFLLRVWEGMDINETATIMRCSASSVKTHYARALEKLREK 182
114331386 160 LEGKG 164
213158284 192 LAHLN 196
169632710 199 LAHLN 203
169795054 199 LAHLN 203
215482602 192 LAHLN 196
302039471 178 LGAHW 182
39995827  176 LEEYG 180
78223809  181 LEEYA 185
220935317 184 LEAYR 188
253996600 183 LEDHQ 187
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