Conserved Protein Domain Family
Wnt_Wnt5

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cd19337: Wnt_Wnt5 
Wnt domain found in protein Wnt-5a, Wnt-5b and similar proteins
The family includes Wnt-5a and Wnt-5b, both of which are secreted growth factors that belong to the noncanonical members of the Wingless-related MMTV-integration family. Wnt-5a can activate or inhibit canonical Wnt signaling, depending on receptor context. It specifically regulates dendritic spine formation in rodent hippocampal neurons, resulting in postsynaptic development that promotes the clustering of the postsynaptic density protein 95 (PSD-95). The overexpression of Wnt-5b is associated with cancer aggressiveness. Wnt genes have been identified in vertebrates and invertebrates, but not in plants, unicellular eukaryotes, or prokaryotes. In humans, 19 WNT proteins are known. Because of their insolubility little is known about Wnt protein structure, but all have 23 or 24 Cys residues whose spacing is highly conserved. Signal transduction by Wnt proteins (including the Wnt/beta-catenin, the Wnt/Ca++, and the Wnt/polarity pathway) is mediated by receptors of the Frizzled and LDL-receptor-related protein (LRP) families. The Wnt signaling mediated by Wnt proteins that orchestrate and influence a myriad of cellular processes, such as cell proliferation, differentiation, tumorigenesis, apoptosis, and participation in immune defense during microbe infection.
Statistics
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PSSM-Id: 381711
Aligned: 29 rows
Threshold Bit Score: 428.2
Created: 19-Jan-2018
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Frizzled
Feature 1:Frizzled receptor binding site [polypeptide binding site]
Evidence:
  • Comment:The structure of Xenopus Wnt8 (XWnt8) in complex with mouse Frizzled-8 (Fz8) cysteine-rich domain (CRD) reveals an unusual two-domain Wnt structure, not obviously related to known protein folds, resembling a "hand" with "thumb" and "index" fingers extended to grasp the Fz8-CRD at two distinct binding sites.
  • Comment:Based on the structure of Xenopus laevis Wnt8 (4F0A) in complex with the cysteine-rich domain of frizzled 8.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
P41221        69 CSqlaGLSQGQKKLCHLYq--DHMQYIGEGAKTGIKECQYQFRhRRWNCStv----dnTSVFGRVMQIGsRETAFTYAVS 142 human
XP_009022920  17 CEkfqGFSSQQRRMCFIYl--DHMPALARGAYLALQECQHQFRdHRWNCTva----nsSHIYSHFANLGtPEIGFVHSIM 90  Helobdella robusta
AGW25595      29 CSarrGLSQRQVKLCNEYr--NHMQFIVDGTKMALDECQRQFKdRRWNCTfpl---nhMRGFIPYIPKGhREASFVHAIV 103 Rhopilema escul...
XP_022781124  83 CHh-mGLSDDQKQICMSEanrELLPTIRYGASLAYKQCQYQFKyRRWNCSvpe--kdsNSLFRRITGKGtKEAAFTYAIS 159 Stylophora pist...
CAD54640      30 CDerrGLTKAQVKLCYTYr--KHMAYVLDGSRIAMDECRKQFAgRRWNCTfpr--qglTPFLHPQIKIGtKEAAFIHSIV 105 Hydractinia ech...
XP_020904200  83 CGy-qDLSPSQRKICEDHe--DQVTSVGEGVKMAIAECQHQFQyRRWNCSvpk--hdgRRLLIRITNQDtREAAFTYAIT 157 Exaiptasia pallida
XP_015760766  64 CDgmtDLNMEQKALCEENr--DVMASIRYGATLAVKQCQYQFQyRRWNCSlpe--qdrYTLFRRITGKGtKEAAFTYSIS 139 Acropora digiti...
XP_020618920  81 CDg-mGLTKGQTRLCVANr--ELMPSIRNGARLATEQCEYQFKyRRWNCSvpe--rdsKAPFRRITGKGtREAAFTYAIA 155 Montastraea fav...
BAH23774      17 CDkrrSLTEKQIKLCNTNs--DHMAYIIEGRRIAIEECMKQFSdRRWNCTfpe--pniIPFLHPYMPLGtRETAFVHSII 92  Hydra vulgaris
Q5IHW1        32 CMnlgGLTREQIDLCQKNi--DHMASVGLGAKMAIQECQFQYQyEKWNCSipdaekssLFERITSKDVAtREAALTYAIS 109 starlet sea ane...
Feature 1                                                                                        
P41221       143 AAGVVNAMSRACREGELs--tCGCSRaaRPKDLPRDWLWGGCGDNIDYGYRFAKEFVDARERErihak-----gsyesAR 215 human
XP_009022920  91 SAFIASSLARACKDGELt--tCGCSRkdRPRSLPQDWLWEGCGDDVNYGRLFTEKFVKAHYDTnpsks------treyLS 162 Helobdella robusta
AGW25595     104 SAGTFHAVSRACMEAKLts-hCHCSQeaRPDSLRKSFLWAGCGDNLPYGYSFSKLFMDAREQLgsdatq----diqkiSR 178 Rhopilema escul...
XP_022781124 160 AAGVLHSIARSCVEGNLs--mCGCSRerRPKDLNSNYQWGGCGDNIEYGVKFAKKFMKAGESStepkd------trelER 231 Stylophora pist...
CAD54640     106 AAGAMHTISRACMENKLsk-fCGCSKegRPDDLPKTQLWRGCGDNLPYANKFSKQFIDASEMMkikik-----ifqpfSR 179 Hydractinia ech...
XP_020904200 158 SAAVVWALARACAEGNFskdeCSCSRerRPDSLKEDYMWGGCGDNIIVGTNFSKRFLDEEENDnlqkadrqgnqqvikDR 237 Exaiptasia pallida
XP_015760766 140 AAGVVYSIARSCVEGNLs--vCGCSRerRPKNLNSEFQWGGCGDNIDYGSKYTMKFMKAGERKtegd-------tsqqEM 210 Acropora digiti...
XP_020618920 156 AAGVVHSIARACVGGNLs--lCGCSRepRPENLKKDYQWGGCGDNILYGAEVAKQFLTAGEEHkskd-------sskmER 226 Montastraea fav...
BAH23774      93 AAATMHSISRACMENKLss-hCSCSQekKPENLPKTDMWNGCGDNLPYGYQFSKEFVDSKETIlkds-------afnfGR 164 Hydra vulgaris
Q5IHW1       110 SAGVVWALARACTEGNLs--tCSCSRerRPLDLNKEYQWGGCGDNIEYAVKFGREFMEAGEDHrptee-----drkkyAR 182 starlet sea ane...
Feature 1                               ##  ###       #                                          
P41221       216 ILMNLHNNEAGRRTVYnlADVACKCHGVSGSCSLKTCWLQLAdFRKVGDALKEKYDSAAAMRlnsrgklv---------- 285 human
XP_009022920 163 QITERHNGEVGSRTAVmyARPVCKCHGVSGSCNVKTCWEEVApIRELGDHLKAKYDEAIPVRpskkmniir--------- 233 Helobdella robusta
AGW25595     179 VLMNLHNNEAGRRALMenSFVQCRCHGLIKGCATKTCYRQLKpFKAVGEFLKDQYASGIESEisqkrapvhdgem----- 253 Rhopilema escul...
XP_022781124 232 KLMNLHNNEVGIQVVIkeAKVVCACHGMSGSCNMRTCQRVLSeFRKIGDILHVKYDNAVRVKmerkdtvevlsivkkkrn 311 Stylophora pist...
CAD54640     180 VLMNLHNNEAGRWAVFekSRIQCRCHGVSKNCATKMCYRQLAeFKVVGQRLQELHQSSIKVKlsqvkeetggegln---- 255 Hydractinia ech...
XP_020904200 238 ALMNSHNNEVGRLIVAklSVIECKCHGVSGSCNLKTCWRQLSeFREIGNKLHDKYDAAVSVYsgredgllklfrkk---- 313 Exaiptasia pallida
XP_015760766 211 SKMNIHNIEVGIKVIKenVVLRCKCHGVSDSCEMKTCWKELSlFQDAGNDLLRKYDSAVKVKfdrktrkivkttkitd-- 288 Acropora digiti...
XP_020618920 227 TLMNLHNNGVGIQVVSeeARVFCKCHGLSGSCNIKTCQRHIAeIRVIGDLLHKKYDNALRVKmekknamdilqvmkrkkn 306 Montastraea fav...
BAH23774     165 VLMNLHNNEAGRWAVFekSKIQCRCHGVSKNCATKTCYRQLSeFKDVGYQLEQLHQSAIHVQlsqsgqkndtei------ 238 Hydra vulgaris
Q5IHW1       183 TLMNLHNNNLGRRVVKdiSVVECKCHGVCGSCNLKTCWRQLVeFREIGNALHDKYDAAVQVAlkrkegrslllpmr---- 258 starlet sea ane...
Feature 1                                                                                        
P41221       286 --------qvnsrfnsPTTQDLVYIDpSPDYCVRNEstgslgtqGRLCNKtseGMDGCELMCCGRGYDQFKTVQtERCHC 357 human
XP_009022920 234 --------rknksskkLTKSDIAYFNqPLDYCELNLkkgsfgtkGRFCNKtssGTDGCSHMCCGRGFYSKKITVhEQCHC 305 Helobdella robusta
AGW25595     254 ---elklrekypqyqkISKRNLVYLEeSPNYCLKDMslgslgtkGRQCNRtseGLNSCSLLCCGRGFHVKRQLTrESCAC 330 Rhopilema escul...
XP_022781124 312 geyrrdnrrlrstnkeAGKESLVFTReSPDYCDKSSdfp--gtlGRQCSAesySSDSCEQLCCGRGFQKTQVRVkKKCEC 389 Stylophora pist...
CAD54640     256 ---nmkleqvdlgyntKSXQDLVYVDdSPSYCIKGDgif--gtlGRTCQRnekSLNDCSLLCCGRGHHTKRQIVkEKCGC 330 Hydractinia ech...
XP_020904200 314 ---vtrsyikrdimakPGPDEMVYLKpSPNFCYRNDrlgiygpkGRKCIKgspGTDGCNILCCDRGYTSKWVTVeKRCKC 390 Exaiptasia pallida
XP_015760766 289 -dgykrggrrrstsnrPSSDRLVYLNtSPDYCRRSSkhetlgtvGRECRGdtsGPGNCKELCCRRGFLSRTENTiERCEC 367 Acropora digiti...
XP_020618920 307 gggrrdnaklrsthkkPPSDALVFLKdSPNYCVRSGkhefpgtvGRTCSIesyGTDSCEDLCCGRGHRSAKVTTtHRCKC 386 Montastraea fav...
BAH23774     239 ----tkpvqfnsnidiYTSKDMIYLDdSPSYCNQNLsigsfgteGRECIKddnSSKDCGRLCCEKGHYTKKVFTtENCAC 314 Hydra vulgaris
Q5IHW1       259 ---srhysqrkaksaqETRDELVYIDkSPDFCSKNAahgaqgtrGRKCIKeslGKDGCNLLCCSRGYKMKKEVQaTRCRC 335 starlet sea ane...
Feature 1         # # # #               
P41221       358 KFHWCCYVKCKKCTEIVDQFVCK 380 human
XP_009022920 306 KFRWCCEVKCKVCEKIVDIHWCK 328 Helobdella robusta
AGW25595     331 QFIWCCHLKCQTCEVEKNMHYCK 353 Rhopilema esculentum
XP_022781124 390 KFHWCCEIRCKQCEHLETRHTCT 412 Stylophora pistillata
CAD54640     331 KFVWCCEVKCQTCEKEQNVHYCK 353 Hydractinia echinata
XP_020904200 391 KFKWCCKVTCKKCLSRVMEHTCN 413 Exaiptasia pallida
XP_015760766 368 KFVWCCKVSCKQCMIARTKYNCL 390 Acropora digitifera
XP_020618920 387 KFHWCCEIRCDKCTKVEIQHTCR 409 Montastraea faveolata
BAH23774     315 KFIWCCEVKCQSCKKQQNKHYCK 337 Hydra vulgaris
Q5IHW1       336 KFHWCCKVKCKTCIKNVTTHICN 358 starlet sea anemone

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