4KNC


Conserved Protein Domain Family
AlgX_N

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cd14441: AlgX_N 
Click on image for an interactive view with Cn3D
N-terminal catalytic domain of the putative alginate O-acetyltranferase AlgX
The alginate biosynthesis protein AlgX appears to be directly involved in the O-acetylation of alginate, an exopolysaccharide that is associated with the formation of persistent biofilms, such as those by mucoid strains of Pseudomonas aeruginosa that affect patients suffering from cystic fibrosis. This N-terminal catalytic domain resembles SGNH hydrolases, though with a permuted topology. The active site matches that of the SGNH hydrolases, is well conserved, and has been verified experimentally. AlgX contains a C-terminal carbohydrate binding domain that belongs to the wider family of CBM6-CBM35-CBM36_like domains.
Statistics
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PSSM-Id: 270207
Aligned: 22 rows
Threshold Bit Score: 283.433
Created: 9-Jul-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active site
Conserved site includes 3 residues -Click on image for an interactive view with Cn3D
Feature 1: active site [active site], 3 residue positions
Conserved feature residue pattern:D H SClick to see conserved feature residue pattern help
Evidence:
  • Comment:Catalytic triad characteristic for SGNH-hydrolases

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
4KNC_B        14 AGNLCPAAAYDSRyn-------tKYLGFFTHLVQAqdDWLFRTtyDLRTDFGtsaEGWRELRALRDELKRK-GIELVVVY 85  Pseudomonas aer...
WP_004432948  31 FAATPALAGKACPdi-------gNKKTEFNLAEGLd-GVFFRTntDFEEFFVrtsETMASLRAISDALRVK-GTELVFLP 101 Agrobacterium t...
WP_020040801  26 TPLAAQQADASSYgcr-----dlTSAKPMAFLEGEg-GVFYRLnlDMRMNHPfseRAAASVKALSDALAAK-GTTLVYLP 98  Salipiger mucosus
WP_018855429   3 AHTAKAESNFGCAn--------lETDKQLSVVEGRq-GYFYRTiaDLRMEQQlseHTASQMAALSEALEAG-GTTLVYVP 72  Rhizobium sp. 4...
WP_006275275  49 SWICNQLEDAQYY----------SDESYIFIRRGKg-DWLFRShtDFNVYPPvagSLVNNFAHLNKVLKAS-NVRLAVLV 116 Asticcacaulis b...
WP_017006060  29 TSVCSEATIRANFpq------alATAAFPLVLDDD--GWMSGGsrELSHGFVe--SDLKDLERLLKAIKSQgTSYVYFAL 98  Enterovibrio no...
WP_007602963  24 AAWAQADADPSSSygc----rnlEEISELQMIEGKd-GMFFRIlaDLRLQHAftdQTADNLAAMSKALEQK-GTTLIYVP 97  Rhizobium sp. P...
WP_018063761  18 CGIAQAEEAQSLYgca-----nlAEKGEPQALEGKd-GYFFTVmgDIAMKSVadpALAESVAAFSKLLKAH-GTILIFVP 90  Martelella medi...
YP_001533247  24 ADLLEAERLPAKY----------ARNAPIYSDAAS--GWVFTQd-QLKERYAmkpAAQALVAEIVREFDKR-DVALAIVV 89  Dinoroseobacter...
WP_007760515  28 LSVASASAGEILYkceglvekspQTSIAVKMYQGYg-GWFFREg-DMENMYElsaETLDAFKDVNDALRYR-GIHLILVP 104 Rhizobium sp. C...
Feature 1                                                                               # #      
4KNC_B        86 QPTRGLVNrEKLSPAeka---gfdYELAKKNYLATIARFRQAGIWTPDFSPLf-DEKe-----eHAYYFKGDHHWTPHGA 156 Pseudomonas aer...
WP_004432948 102 LPPRGIVQrAKLDDSdeiq-arynAPVAEQEFRHYVMQLQRNGITTVDVLKAidDHQa-----rGNFFFARDHHWTSSGA 175 Agrobacterium t...
WP_020040801  99 VPTKSLAMpDELPPAaasf--gydGAVARKAYRAFIDRFREVGVPVVDTATAmrGAEg-----pEPPFVATDFHWSSTGA 171 Salipiger mucosus
WP_018855429  73 IPTKSLVMpEYLPREagdy--gfdYDVAKRVYDDVIKRLRDHGVVTVDVLGAm-KRAgg----qEPPFFQADFHWTSSGA 145 Rhizobium sp. 4...
WP_006275275 117 TPPRGSMMrEFIDPAarnt-erysPDIAMQSYQKTLSRLRSTGIFVPDVTAAalDNNlslpgtnSQFYLSGDIHWTAYGA 195 Asticcacaulis b...
WP_017006060  99 APPRTLEK-GKLIHGey-----snRETLKNAYLSLLSRLNDVGFLTSDLSKDm-NTAs------PSFYFKRDTHWRPEGA 165 Enterovibrio no...
WP_007602963  98 LPTKSQVLpELVPARasly--gfdADIAMQIYSDVIRRLSDRDVAAVDIASPmrEDNing--fgEHSFFQSDFHWTAHGA 173 Rhizobium sp. P...
WP_018063761  91 VPTRSQVLaDKVPQAawly--gykENINTEIYQEAIKRLNDAGVVTVDLLTPm-KAKaa---ddSPVYQKADPLWTTEGA 164 Martelella medi...
YP_001533247  90 PPPRPIIAgQAHFDAamge-ahhdLDAAQASFGDLITGLAATGAIVPNLQELalSDAdl----rAAFYFKRDTHWTTTGA 164 Dinoroseobacter...
WP_007760515 105 MLPRGIAGgPFIPNGgifsdmfydPAFSAEQFRAMVQSLRDVGIDAVDITKIk-DTKtdf--dwNSYYLKRDIHWTPEGA 181 Rhizobium sp. C...
Feature 1                                                                                        
4KNC_B       157 RRSAKIVAETLKQVPGFEEIPKKQFeskr---vglLSKLGTFHKAAAQLCGNSYATqYVDRFETEPVGAsdsg----dlf 229 Pseudomonas aer...
WP_004432948 176 HLVAFAAAETIKKLAAYPSLSTYNFetka---vgsLDYIAPMGHEIQALCGSAVEPeKETLWQTTRSADdasdl--lgna 250 Agrobacterium t...
WP_020040801 172 RAVAGQVAETLAALPVHEDMAKTDHvtrk---tetDKLASAMRRRIQPYCSDSIPQaETQGFVTEATSDsggste-ggif 247 Salipiger mucosus
WP_018855429 146 RAAADGIAAVIQQLPGVNDLAKASFetkp---agrQAIISTMRRLLQANCKQALPLpETDAFTTTEVAAgdagl---dif 219 Rhizobium sp. 4...
WP_006275275 196 YVTANATARELARHPEYRNIPKTEFktal---gavREEQQMLRLEASRICHSTYKAdKIRAFETVRAAAgagg-----nl 267 Asticcacaulis b...
WP_017006060 166 KISAKNISDALSENNILNDIPLHSVesfi--ngynIQSSDFFNQVMQDICGYKLPTeHAPNYESTPDVDadi-------f 236 Enterovibrio no...
WP_007602963 174 SVAAKAIAERMKQLPAYADVTPVPFnmee---vkpDPEYSSMRELLQKHCTSNVPTvTAHAYRAVRNEEaatdgasvdif 250 Rhizobium sp. P...
WP_018063761 165 RFAAEAIAGKITAMPQSRKANLMTFtttk---gedYTRRSDLREAIQAHCSESLPPvTETRYETVGEEAfaadrpfnilg 241 Martelella medi...
YP_001533247 165 LASARAVAQATATARSDLFPDMPADapamaplettIEEKGSLARILRDVCDIEPGReTAPLYNYARASAagl-------l 237 Dinoroseobacter...
WP_007760515 182 QVVAKALAEKVRGLAGEIADTVEFKtelt---gkvAPIRFNMGKALNEICQEKIPTeSVTGYSTKRNVDnldal---lte 255 Rhizobium sp. C...
Feature 1                      #                                                                 
4KNC_B       230 gDGGNPq-IALVGTSNSGp----aYNFAGFLEEFSGADILNNAVSGGGFDSSLLAYMTSEEFHKNPPKILIWEFAThy-- 302 Pseudomonas aer...
WP_004432948 251 tETSPP--VALVGSSFSAtp---eFNFAGFLAQETGLDITNYAENGAQFISSLATLVFSKGFHEKPAPLIVWEAPSyyav 325 Agrobacterium t...
WP_020040801 248 aDAESAppISLVGTSMSAep---aFNFEGFLAEAAGAEVANYAITGGNQFGSITSYLLSADFRDAPPDVLIWENPIynnl 324 Salipiger mucosus
WP_018855429 220 gDGTSKgaVALVGTSYSDla---aSNFAGFLSQALSSPVTNYSISGGNQFGSITSYLTSKTFAQSRPRFLIWENPIynsl 296 Rhizobium sp. 4...
WP_006275275 268 lDGGDVe-IALVGTSFSVrp---tANFSGFLRQELRADVANYAIGGGGFEASILSYLLSADYQAAKPKVLIWEMQYh--- 340 Asticcacaulis b...
WP_017006060 237 gDSLTPd-ISLIGTSYSEne---nYHFANFLRGYLQRDIVNHSISGGGEYGAWFNFFSNKSKDSTPPKIIIWELPSys-- 310 Enterovibrio no...
WP_007602963 251 gGGDEAt-VALIGTSYSDkp---iSNFSGYLEHWAQIPIDNYSISGGNQFGSILSYITSREFQEQRPRFLIWENPIynnl 326 Rhizobium sp. P...
WP_018063761 242 aEAPAP--VVLVGSRFSAdg---qSHFDGFLKQFSNMDVDNRASASANPFKSITDYLRSGDLQAKPPLFLVWEVPPgsnl 316 Martelella medi...
YP_001533247 238 aDVTDAprVALLGSSFSDryqtdhYRFADALSQAFDLDVENFSVSGGGPIGALEGYILSGALDRRDHPMVIWELPYte-- 315 Dinoroseobacter...
WP_007760515 256 gDTPGQelVHIVGTSFTDer--mdFNFNGFLREALKHDLSGFSIAGGGLTQSIYGWTQNANGLAKKPEILVWEYSDlq-s 332 Rhizobium sp. C...
Feature 1                            
4KNC_B       303 dMAQKSFYRQAMPLVDNGCS 322 Pseudomonas aeruginosa PAO1
WP_004432948 326 dQTMFQASRQLLAAVYGSCE 345 Agrobacterium tumefaciens
WP_020040801 325 gEFGELPWLELIAAVQDSCE 344 Salipiger mucosus
WP_018855429 297 gKFGDAPLLELRTAAGQSCH 316 Rhizobium sp. 42MFCr.1
WP_006275275 341 nLDGVASFPLILGAADGDCG 360 Asticcacaulis biprosthecium
WP_017006060 311 hPARYKHLRQIIPLVNNGCQ 330 Enterovibrio norvegicus
WP_007602963 327 gQFGAAPWKEIIAASLGECS 346 Rhizobium sp. PDO-076
WP_018063761 317 aSYGPEPWETLEASAAGDCG 336 Martelella mediterranea
YP_001533247 316 nFNSVSFLRQLLGALKYRSS 335 Dinoroseobacter shibae DFL 12
WP_007760515 333 vLRSVDYVDEAIVPAIVGDC 352 Rhizobium sp. CF080

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