Conserved Protein Domain Family
RlhA

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COG0826: RlhA 
23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family [Translation, ribosomal structure and biogenesis]
23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family is part of the Pathway/BioSystem: 23S rRNA modification
Statistics
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PSSM-Id: 440588
Aligned: 664 rows
Threshold Bit Score: 89.4329
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_106703792   1 MKAPELLLPAGSLDKMRAAYDFGADAVYAGQPRY-SLRARNNEF-R-LEQLAEGIAEAHARGKKLFVTSNLIAHND-KVR 76 
WP_126309632 351 nfRSSLAVRVANLAALTAAFESGADIAYIGGEAF-KPNK---PW-T-LDDIKQAVDLAKIYGKQVVVTTPRITLER-ECG 423
WP_013175004 339 gsVPSLSVKVGGLEAFFGVIGRGVDTVIIGGDGFkNSKD---NW-D-EASLLRAIQAGNDKGVSVVLETPRIVTQK-DLD 412
WP_083763010 365 VALPLLSIKVNGLEEAEAALKSGVDRIYIGGETp-SWKP---PC-G-QEVINKVLDKAEKAGVEVVVTTPRITFSD-EME 437
WP_015437987   1 M--FELSTDVGNLKELRKGNFSAYDALYLGDF---SCPDYPNNFsShPELLEACLEIVKSHGQKAYLRLYAVPGNS-DLG 74 
WP_013175004 339 gsVPSLSVKVGGLEAFFGVIGRGVDTVIIGGDGFkNSKD---NW-D-EASLLRAIQAGNDKGVSVVLETPRIVTQK-DLD 412
WP_108849722 520 KKDARIWVRTNSLRHIKEAVSQGIKGFIFGGDSF-DHV----PV-K-MDDYMKAAEFCRNNDAEIIFATPRVVRDKyEKQ 592
WP_014128356 539 rrhaELSVHVDTLDKAKAALSGGADVLIVGGDSF-TLPL----L-T-LKDLETLGHWVREKGKKWYIGTSRVVSEG-QLS 610
WP_083763010 365 VALPLLSIKVNGLEEAEAALKSGVDRIYIGGETp-SWKP---PC-G-QEVINKVLDKAEKAGVEVVVTTPRITFSD-EME 437
WP_108849722 520 KKDARIWVRTNSLRHIKEAVSQGIKGFIFGGDSF-DHV----PV-K-MDDYMKAAEFCRNNDAEIIFATPRVVRDKyEKQ 592
WP_106703792  77 TYLRDLQPVVELKPHALIMADAGLIMLVREQmekglWPHVPIHLSVQANSTNWAAVKFWQRAGVERIILSRELSLAEVEQ 156
WP_126309632 424 ELEQLITSLNELRPHGLMVSNSGMLRLARSI------SPLPVQADFSFNLFNHLTVQWLKSNGAVKAAFSLEATYEQIAE 497
WP_013175004 413 GVITLLSIPEMKGLSAVMVHDLGSLRIAREL-------GLTVWAGYGLNLTNGTSVKFLASQGVQRVTASLELKLADLKN 485
WP_083763010 438 EYIELLKGLDLEQTGGVMAGNLGMIRALNEY-----F-DTRVMADFGVNAFNTRALSILKESGVVQVTNQLESSLKQILK 511
WP_015437987  75 WVEDLIDTALELPFDALEVHNLGVLRMLNEK-----GCRLPIHLGVFGNLYTHETAKVLKDYGVTRVYPNPELSLAEVRY 149
WP_013175004 413 GVITLLSIPEMKGLSAVMVHDLGSLRIAREL-------GLTVWAGYGLNLTNGTSVKFLASQGVQRVTASLELKLADLKN 485
WP_108849722 593 ASRRFLKILENVRPDGILVEFLGALEWLKDL-----HDGIPVYAGSSLNIFNSEAADTLTRWGFSGVLLSQELTIPQIRG 667
WP_014128356 611 YYDQVLPRWQALSPDGIVVSNNGLVEKVLAQ-------GLPLWVDWDQNTFNSQSILFWQELGAEGITLSPELTLSQVEG 683
WP_083763010 438 EYIELLKGLDLEQTGGVMAGNLGMIRALNEY-----F-DTRVMADFGVNAFNTRALSILKESGVVQVTNQLESSLKQILK 511
WP_108849722 593 ASRRFLKILENVRPDGILVEFLGALEWLKDL-----HDGIPVYAGSSLNIFNSEAADTLTRWGFSGVLLSQELTIPQIRG 667
WP_106703792 157 IRNECpDIELEVFVHGALCIAYSGRCLLSGYFNrRDPNQG------TCTNAC-RWNYKtvdadvdpntgealargerldg 229
WP_126309632 498 VVKNS-PLPLEMIVHGGLEAMVLDHCIPTALLA--ASEKS------PCNSLClNKQYT---------------------- 546
WP_013175004 486 MVGKS-CLEIELMVQGPLCGMITDYCPIQAVWA-EG-DDD------GCKTACnRAEYC---------------------- 534
WP_083763010 512 MASGT-DMDLELIGHGHLPFMVSDHCLLSELLE-GKTPED------QCSAPCrGERYG---------------------- 561
WP_015437987 150 IAEHA-DVEVLVPVHGKIPLVISETCFILEHSE-DGAQSGnecgngTCSYQCtQEHW----------------------- 204
WP_013175004 486 MVGKS-CLEIELMVQGPLCGMITDYCPIQAVWA-EG-DDD------GCKTACnRAEYC---------------------- 534
WP_108849722 668 IRRES-RIPLAVYAYGRTELMVSEYCVINSVCG-DI-DKS------HCPGYCqQKRYF---------------------- 716
WP_014128356 684 LARKS-NLPLECLAEGSLEMMVSEYCVEGSFLG-HL-DQG------HCDYHCkEAGF----------------------- 731
WP_083763010 512 MASGT-DMDLELIGHGHLPFMVSDHCLLSELLE-GKTPED------QCSAPCrGERYG---------------------- 561
WP_108849722 668 IRRES-RIPLAVYAYGRTELMVSEYCVINSVCG-DI-DKS------HCPGYCqQKRYF---------------------- 716
WP_106703792 230 fsfgaeaeraeqaalggestcgngqrhpsadkvylIE-EEGrPGQL--MPIMEDEHg-TYIMNSKDLRAVELVEKLTKIG 305
WP_126309632 547 -----------------------------------LL-DS--ASQT--HPIRIDQYcrNHVLFAKDLCLLPHLGALVAAG 586
WP_013175004 535 -----------------------------------LE-DE--YQQR--FRILNDDRcrTHIFFPLDLCLFGYLPLIKDMG 574
WP_083763010 562 -----------------------------------LV-ND--KKRV--YPVMTDQYcrTHLYLSKELALLPFLDRILLSG 601
WP_015437987 205 -----------------------------------LKrGRG-DGSRadWSL---KDtgRMTLSGKDLCMLEHATKLAEMG 245
WP_013175004 535 -----------------------------------LE-DE--YQQR--FRILNDDRcrTHIFFPLDLCLFGYLPLIKDMG 574
WP_108849722 717 -----------------------------------LK-DD--TGRL--FPVRTDEWchMHIQNSSVLDMRPYISQLAESG 756
WP_014128356 732 -----------------------------------LE-DR--KKVR--FPLKQDQFgrMHILNGQRLSMLAHAKKMEKMG 771
WP_083763010 562 -----------------------------------LV-ND--KKRV--YPVMTDQYcrTHLYLSKELALLPFLDRILLSG 601
WP_108849722 717 -----------------------------------LK-DD--TGRL--FPVRTDEWchMHIQNSSVLDMRPYISQLAESG 756
WP_106703792 306 VDSLKIEGRTKSLYYVARTAQTYRRAIDDAVAGRP---FNpaliTELEGLANR--GyTSG----FLE 363
WP_126309632 587 VSHYRLEGQYYSPEHVGLVTGIYRQELTKISANLPgyrFDttltERIAAESPRelGi--Ga--fRYR 649
WP_013175004 575 INSIRIEGHYYRLDTLLEVVDIYRDGLRDLAQGRW---EGekgyRRLLRLFAH--GlTTNplvhRLA 636
WP_083763010 602 IKSFRIEAGLYNAAKVEAVVDIYKRAFIAIKNGRWsqek-tslyNELKGLSDT--GyTLAa---YEK 662
WP_015437987 246 LSHFYVHNKGEAAGYAESVGRIYREALTQAFAGAPaadp-ssslATLTGLARE--GlCNGy---YFE 306
WP_013175004 575 INSIRIEGHYYRLDTLLEVVDIYRDGLRDLAQGRW---EGekgyRRLLRLFAH--GlTTNplvhRLA 636
WP_108849722 757 INALCLDFRGID-ESVSDVCSDYVQILNGNKMPP----------DPSERGNSR--KiSRGh---FFK 807
WP_014128356 772 LARLRFDARNASVEETGVLTAMYRGVLDGVT--------------LVEe-nEP--GtTRGh---YFR 818
WP_083763010 602 IKSFRIEAGLYNAAKVEAVVDIYKRAFIAIKNGRWsqek-tslyNELKGLSDT--GyTLAa---YEK 662
WP_108849722 757 INALCLDFRGID-ESVSDVCSDYVQILNGNKMPP----------DPSERGNSR--KiSRGh---FFK 807
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