2NWM,2DLM


Conserved Protein Domain Family
SH3_Vinexin_1

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cd11921: SH3_Vinexin_1 
Click on image for an interactive view with Cn3D
First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
Vinexin is also called Sorbs3, SH3P3, and SH3-containing adapter molecule 1 (SCAM-1). It is an adaptor protein containing one sorbin homology (SoHo) and three SH3 domains. Vinexin was first identified as a vinculin binding protein; it is co-localized with vinculin at cell-ECM and cell-cell adhesion sites. There are several splice variants of vinexin: alpha, which contains the SoHo and three SH3 domains and displays tissue-specific expression; and beta, which contains only the three SH3 domains and is widely expressed. Vinexin alpha stimulates the accumulation of F-actin at focal contact sites. Vinexin also promotes keratinocyte migration and wound healing. The SH3 domains of vinexin have been reported to bind a number of ligands including vinculin, WAVE2, DLG5, Abl, and Cbl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies.
Statistics
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PSSM-Id: 212854
Aligned: 4 rows
Threshold Bit Score: 108.472
Created: 6-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
peptide ligand
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1:peptide ligand binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of peptide ligands to the SH3 domains of other superfamily members
  • Comment:SH3 domains typically bind proline-rich ligands, preferentially to PxxP motifs.
  • Citation:PMID 7664083
  • Citation:PMID 7735837
  • Comment:flanking hinge and loops (RT and n-Src) confer sequence specificity for ligand residues outside the core binding motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              # #  #      #                 ##            # ##    
2NWM_A         2 KAARLKFDFQAQSp---KELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVL 56  human
2DLM_A         8 KAARLKFDFQAQSp---KELTLQKGDIVYIHKEVDKNWLEGEHHGRLGIFPANYVEVL 62  human
XP_003227092 362 RKPRPPQGKLEQLstqeWELTLQKGDIVYIHKEVDKNWLEGEHHGRVGIFPANYIEVL 419 green anole
NP_001014312 218 KAARAKFNFQAQSp---KGLTIQKGDVVYIHRQIDANWYEGEHHGRVGIFPTSYVEII 272 zebrafish

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