1FPZ,2DXP,1FQ1,2I6O


Conserved Protein Domain Family
CDKN3-like

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cd14505: CDKN3-like 
cyclin-dependent kinase inhibitor 3 and similar proteins
This family is composed of eukaryotic cyclin-dependent kinase inhibitor 3 (CDKN3) and related archaeal and bacterial proteins. CDKN3 is also known as kinase-associated phosphatase (KAP), CDK2-associated dual-specificity phosphatase, cyclin-dependent kinase interactor 1 (CDI1), or cyclin-dependent kinase-interacting protein 2 (CIP2). It has been characterized as dual-specificity phosphatase, which function as a protein-serine/threonine phosphatase (EC 3.1.3.16) and protein-tyrosine-phosphatase (EC 3.1.3.48). It dephosphorylates CDK2 at a threonine residue in a cyclin-dependent manner, resulting in the inhibition of G1/S cell cycle progression. It also interacts with CDK1 and controls progression through mitosis by dephosphorylating CDC2. CDKN3 may also function as a tumor suppressor; its loss of function was found in a variety of cancers including glioblastoma and hepatocellular carcinoma. However, it has also been found over-expressed in many cancers such as breast, cervical, lung and prostate cancers, and may also have an oncogenic function.
Statistics
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PSSM-Id: 350355
Aligned: 25 rows
Threshold Bit Score: 147.41
Created: 4-Oct-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
active sitecatalytic site
Conserved site includes 9 residues -Click on image for an interactive view with Cn3D
Feature 1: active site [active site], 9 residue positions
Conserved feature residue pattern:x C x x x x x R xClick to see conserved feature residue pattern help
Evidence:
  • Structure:2DXP: Sulfolobus solfataricus PTP-fold phosphatase binds phosphopeptide A-(P)y-R; contacts at 4A
  • Structure:1FQ1: Human CDKN3 in complex with phospho-CDK2; contacts at 4A
  • Structure:2I6O: Sulfolobus solfataricus PTP-fold phosphatase binds phosphopeptide N-g-(p)y-k-n; contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
1FPZ_A         29 ISWLSlsrv------------------------ncsQFLGLCALPGckfkd------vrrnVQKDTEELKSCg-iQDIFV 77   human
2DXP_A          1 MYWVRr------------------------------KTIGGSGLPY---------------TENEILEWRKEg-vKRVLV 34   Sulfolobus so...
CAA45388       14 IAEVPagp--------------------------glGRIGITFCPGkhdraam-sgawardLGLDLDAIADWg-aAHVLT 65   Rhodobacter c...
ADI18239       10 INTVTlgd--------------------------ngGLIGMCCCPGrveqhnd-gvhrsrdLAEDLAVVSDWq-pDLVIS 61   uncultured ga...
ACB05946       10 IPGLP-------------------------------GKLIFTPCPGtkg----------tsLTAALAALKQAg-aTAAIT 47   Pseudomonas s...
YP_855023      31 SQEVPrv----------------------------dGQLLLTPCPGtqq----------vaLPLALGQLKLAg-aHGVLT 71   Aeromonas hyd...
NP_230715       5 TWELPvad--------------------------nqASLVLTPCPGtkg----------tpLPESIAQLKAQg-vSAVVT 47   Vibrio choler...
XP_001013080   26 ISWIIdatqytqqnefekqesdvkeinqqdkttllaSKFGLCHCPGkklakgrdgkvhdrdLRVDVEQFSSQdnvKTIIC 105  Tetrahymena t...
XP_001691851   37 VSFLPpats-----------------------pvtgSRLGLTVCPGkhilsrd-gtlfcrdLGADLKRLREVhgaDVVVA 92   Chlamydomonas...
XP_002681824 1122 IDWINlkmldqqaaekreinntqnsengatpkkkkyGRLGISIIPGrpsh--------ggvMVNDLKVLQKNn-vKKLVV 1192 Naegleria gru...
Feature 1                                           #                                  #######    
1FPZ_A         78 FCTRGELSKYrv--pnLLDLYQqcGIITHHHPIADGGTPD----IASCCEIMEELTTCLKny-rKTLIHSYGGLGRSCLV 150  human
2DXP_A         35 LPEDWEIEESwgdkdyYLSILKknGLQPLHIPIPDGGVPS----DSQFLTIMKWLLSEKE----GNLVHSVGGIGRTGTI 106  Sulfolobus so...
CAA45388       66 LVEPQELGMLkv--pdLGTQGPraGMDWHPLPIADYSVPTpa-fEARWQAEGRVIRAALRag-aDVVVHCKGGLGRAGMI 141  Rhodobacter c...
ADI18239       62 LVEQHEFDFLgv--aqLPEEFKk-RFQWQHHPVRDLAATSe--aTGENTVLGEWFASVYRg--gRVLLHCAAGLGRTGTV 134  uncultured ga...
ACB05946       48 LMPQSELDTNda--gdISRQCEvlGLAWYHLPVADEQVPLed-fGRQWKEARQPILSQLKag-eSLAVHCKGGSGRTGLI 123  Pseudomonas s...
YP_855023      72 LMTDAELARLel--grLGQQIEaaGMRWFQLPIEDDQAPDaa-fEAAWQQTLPDLIGLLRdg-kHLVIHCKGGSGRTGLV 147  Aeromonas hyd...
NP_230715      48 ALSHEEMEQHgv--geLPAEVEkaGLQWFHAPIEDDCAPDaa-fAQDWQHCSPALHQALSrg-eKVALHCMGGSGRTGLL 123  Vibrio choler...
XP_001013080  106 LLNDYELRSIgvdvkqYQKICQekGITFIQYPIIEMSVPEcksmDQFDQEVIQFIINEMKqn-kNVLCHCRGGIGRAGLI 184  Tetrahymena t...
XP_001691851   93 LLPEAELRYLkv--rdYASAVAahGMEYLHLPIVEMAAPPd---LQQAAALVDMVVERIGag-kTVVLHCKGGVGRAGVI 166  Chlamydomonas...
XP_002681824 1193 LSTQDELEHLsg--nlLREATNl-GIETRMLPVQQRHPPP----MNYTLLLCEWIKEALDkkgeDVVIVSVSGLGRSGTL 1265 Naegleria gru...
Feature 1                                        #          
1FPZ_A        151 AACLLLYLSdt-iSPEQAIDSLRDLRGsGAIQTIKQYNYLHE 191  human
2DXP_A        107 LASYLILTEg--lEVESAIDEVRLVRP-GAVQTYEQEMFLLR 145  Sulfolobus solfataricus
CAA45388      142 AAARLLVELg--aDPKAAVNAVRTARP-GAIETPAQLALVRA 180  Rhodobacter capsulatus
ADI18239      135 AARLLMMAGe---DADTAIKRVRAARP-GTVESGAQERFLHQ 172  uncultured gamma proteobacterium HF0200_40H22
ACB05946      124 AARILIEAGl---GRDTAIAQVQALRP-KAIQHPAHLNWINQ 161  Pseudomonas sp. TS44
YP_855023     148 AAALLMSLGq---PQQEAMAAIRAHRP-KAFTLACHRQWLDG 185  Aeromonas hydrophila subsp. hydrophila ATCC 7966
NP_230715     124 AAHLLLEKGw---PLESIITQVQALRP-GAFTKEVQVQYVHQ 161  Vibrio cholerae O1 biovar eltor str. N16961
XP_001013080  185 ASCLLLRFKik-nKWSDAIQLVRSIRDqRCVESKKQETFVQQ 225  Tetrahymena thermophila
XP_001691851  167 AACTLLRLHvc-tSARDAIATVRKYRR-GAVESKRQEEFVAT 206  Chlamydomonas reinhardtii
XP_002681824 1266 ASCVLLLRQplllDSAKAMEAVKLARGtRVIENRRQERFVDE 1307 Naegleria gruberi strain NEG-M

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