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NM_147686.4(TRAF3IP2):c.1580C>T (p.Thr527Ile) AND Candidiasis, familial, 8

Germline classification:
Pathogenic (1 submission)
Last evaluated:
Oct 17, 2013
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV000074416.14

Allele description [Variation Report for NM_147686.4(TRAF3IP2):c.1580C>T (p.Thr527Ile)]

NM_147686.4(TRAF3IP2):c.1580C>T (p.Thr527Ile)

Genes:
TRAF3IP2:TRAF3 interacting protein 2 [Gene - OMIM - HGNC]
TRAF3IP2-AS1:TRAF3IP2 antisense RNA 1 [Gene - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q21
Genomic location:
Preferred name:
NM_147686.4(TRAF3IP2):c.1580C>T (p.Thr527Ile)
HGVS:
  • NC_000006.12:g.111559523G>A
  • NG_032030.2:g.51356C>T
  • NM_001164281.3:c.1577C>T
  • NM_001164283.3:c.212C>T
  • NM_147200.3:c.1607C>T
  • NM_147686.4:c.1580C>TMANE SELECT
  • NP_001157753.1:p.Thr526Ile
  • NP_001157755.1:p.Thr71Ile
  • NP_671733.2:p.Thr536Ile
  • NP_679211.2:p.Thr527Ile
  • LRG_1337t1:c.1580C>T
  • LRG_1337:g.51356C>T
  • LRG_1337p1:p.Thr527Ile
  • NC_000006.11:g.111880726G>A
Protein change:
T526I; THR536ILE
Links:
OMIM: 607043.0002; dbSNP: rs397518485
NCBI 1000 Genomes Browser:
rs397518485
Molecular consequence:
  • NM_001164281.3:c.1577C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001164283.3:c.212C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_147200.3:c.1607C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_147686.4:c.1580C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:
Candidiasis, familial, 8 (CANDF8)
Identifiers:
MONDO: MONDO:0014230; MedGen: C3714992; Orphanet: 1334; OMIM: 615527

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV000106037OMIM
no assertion criteria provided
Pathogenic
(Oct 17, 2013)
germlineliterature only

PubMed (1)
[See all records that cite this PMID]

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlinenot providednot providednot providednot providednot providednot providedliterature only

Citations

PubMed

An ACT1 mutation selectively abolishes interleukin-17 responses in humans with chronic mucocutaneous candidiasis.

Boisson B, Wang C, Pedergnana V, Wu L, Cypowyj S, Rybojad M, Belkadi A, Picard C, Abel L, Fieschi C, Puel A, Li X, Casanova JL.

Immunity. 2013 Oct 17;39(4):676-86. doi: 10.1016/j.immuni.2013.09.002. Epub 2013 Oct 10.

PubMed [citation]
PMID:
24120361
PMCID:
PMC3873857

Details of each submission

From OMIM, SCV000106037.6

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedliterature only PubMed (1)

Description

In an affected brother and sister from a consanguineous Algerian family with chronic mucocutaneous candidiasis (CANDF8; 615527), Boisson et al. (2013) identified homozygosity for a c.1607C-T transition in the TRAF3IP2 gene, resulting in a thr536-to-ile (T536I) substitution at a highly conserved residue in the C-terminal part of the SEFIR domain. The mutation, which segregated with disease in the family, was not found in more than 10,000 chromosomes or in the 1000 Genomes Project or dbSNP (build 135) databases. Neither of the affected sibs displayed psoriasis. Functional analysis using patient fibroblasts and EBV-B cells demonstrated that the T536I mutant abolishes homotypic interactions with the SEFIR domain of IL17RA (605461), IL17RB (605458), and IL17RC (610925), but does not affect homodimerization or SEFIR-independent ACT1 interactions with other proteins. Patient fibroblasts did not produce IL6 (147620) in response to IL17A (603149) or IL17F (606496). Stimulation of patient peripheral blood mononuclear cells with IL2 (147680) and/or IL17E (605658) resulted in production of IL5 (147850) only in response to IL2, and there was no synergistic response to costimulation. Flow cytometric analysis indicated that the patients had higher proportions of IL17- and IL22 (605330)-producing cells but normal levels of IFNG (147570)-producing cells, suggesting that responsiveness to IL17 rather than production of the cytokine is critical for protection from chronic mucocutaneous candidiasis.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlinenot providednot providednot providednot providednot providednot providednot providednot provided

Last Updated: Dec 7, 2024