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NM_020208.4(SLC6A20):c.1447G>A (p.Val483Met) AND Intellectual disability

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 29, 2019
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001263400.2

Allele description [Variation Report for NM_020208.4(SLC6A20):c.1447G>A (p.Val483Met)]

NM_020208.4(SLC6A20):c.1447G>A (p.Val483Met)

Gene:
SLC6A20:solute carrier family 6 member 20 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3p21.31
Genomic location:
Preferred name:
NM_020208.4(SLC6A20):c.1447G>A (p.Val483Met)
HGVS:
  • NC_000003.12:g.45762929C>T
  • NG_023204.1:g.38615G>A
  • NM_001385683.1:c.1480G>A
  • NM_020208.4:c.1447G>AMANE SELECT
  • NM_022405.4:c.1336G>A
  • NP_001372612.1:p.Val494Met
  • NP_064593.1:p.Val483Met
  • NP_071800.1:p.Val446Met
  • NC_000003.11:g.45804421C>T
  • NM_020208.3:c.1447G>A
Protein change:
V446M
Links:
dbSNP: rs146575685
NCBI 1000 Genomes Browser:
rs146575685
Molecular consequence:
  • NM_001385683.1:c.1480G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_020208.4:c.1447G>A - missense variant - [Sequence Ontology: SO:0001583]
  • NM_022405.4:c.1336G>A - missense variant - [Sequence Ontology: SO:0001583]
Observations:
1

Condition(s)

Name:
Intellectual disability
Synonyms:
Intellectual functioning disability; intellectual disabilities; Intellectual developmental disorder
Identifiers:
MONDO: MONDO:0001071; MeSH: D008607; MedGen: C3714756; Human Phenotype Ontology: HP:0001249

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001441443New York Genome Center - CSER-NYCKidSeq
criteria provided, single submitter

(NYGC Assertion Criteria 2020)
Uncertain significance
(May 29, 2019)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyes1not providednot provided1not providedclinical testing

Details of each submission

From New York Genome Center - CSER-NYCKidSeq, SCV001441443.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not provided1not providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyes1not providednot provided1not providednot providednot provided

Last Updated: Aug 25, 2024