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NM_001130158.3(MYO1B):c.2775del (p.Lys925fs) AND Colorectal cancer

Germline classification:
Pathogenic (1 submission)
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV001293836.1

Allele description [Variation Report for NM_001130158.3(MYO1B):c.2775del (p.Lys925fs)]

NM_001130158.3(MYO1B):c.2775del (p.Lys925fs)

Gene:
MYO1B:myosin IB [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
2q32.3
Genomic location:
Preferred name:
NM_001130158.3(MYO1B):c.2775del (p.Lys925fs)
HGVS:
  • NC_000002.12:g.191411074del
  • NM_001130158.3:c.2775delMANE SELECT
  • NM_001161819.3:c.2775del
  • NM_001330237.2:c.2688del
  • NM_001330238.2:c.2688del
  • NM_012223.5:c.2601del
  • NP_001123630.1:p.Lys925fs
  • NP_001155291.1:p.Lys925fs
  • NP_001317166.1:p.Lys896fs
  • NP_001317167.1:p.Lys896fs
  • NP_036355.2:p.Lys867fs
  • NC_000002.11:g.192275800del
  • NM_001130158.3:c.2775delAMANE SELECT
Protein change:
K867fs
Links:
dbSNP: rs1697225194
NCBI 1000 Genomes Browser:
rs1697225194
Molecular consequence:
  • NM_001130158.3:c.2775del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001161819.3:c.2775del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001330237.2:c.2688del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_001330238.2:c.2688del - frameshift variant - [Sequence Ontology: SO:0001589]
  • NM_012223.5:c.2601del - frameshift variant - [Sequence Ontology: SO:0001589]

Condition(s)

Name:
Colorectal cancer
Synonyms:
Colorectal cancer, somatic; Malignant Colorectal Neoplasm
Identifiers:
MONDO: MONDO:0005575; MedGen: C0346629; OMIM: 114500

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV001481767Genomic Center, National Cancer Institute
no assertion criteria provided
Pathogenicgermlinecase-control

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineyesnot providednot providednot providednot providednot providedcase-control

Details of each submission

From Genomic Center, National Cancer Institute, SCV001481767.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedcase-controlnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineyesnot providedwhole blood and tissuenot providednot providednot providednot providednot provided

Last Updated: Jul 16, 2023