NM_002017.5(FLI1):c.18+226del AND not provided

Germline classification:: Benign (1 submission)
Last evaluated:: Jun 18, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV001696501.1

Allele description [Variation Report for NM_002017.5(FLI1):c.18+226del]

NM_002017.5(FLI1):c.18+226del

Genes:

FLI1:Fli-1 proto-oncogene, ETS transcription factor [Gene - OMIM - HGNC]
SENCR:smooth muscle and endothelial cell enriched migration/differentiation-associated lncRNA [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

11q24.3

Genomic location:

Preferred name:

NM_002017.5(FLI1):c.18+226del

HGVS:

NC_000011.10:g.128694502del
NG_032912.1:g.12968del
NM_001167681.3:c.-136+226del
NM_001271010.2:c.-352+226del
NM_001271012.2:c.-203+7801del
NM_002017.5:c.18+226delMANE SELECT
LRG_646t1:c.-136+226del
LRG_646t2:c.-352+226del
LRG_646t3:c.-203+7801del
LRG_646t4:c.18+226del
LRG_646:g.12968del
NC_000011.9:g.128564397del

Links:

dbSNP: rs11297252

NCBI 1000 Genomes Browser:

rs11297252

Molecular consequence:

NM_001167681.3:c.-136+226del - intron variant - [Sequence Ontology: SO:0001627]
NM_001271010.2:c.-352+226del - intron variant - [Sequence Ontology: SO:0001627]
NM_001271012.2:c.-203+7801del - intron variant - [Sequence Ontology: SO:0001627]
NM_002017.5:c.18+226del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:: none provided
Identifiers:: MedGen: C3661900

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV001916171	GeneDx	criteria provided, single submitter (GeneDx Variant Classification Process June 2021)	Benign (Jun 18, 2021)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV001916171

GeneDx

criteria provided, single submitter

(GeneDx Variant Classification Process June 2021)

Benign
(Jun 18, 2021)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	yes	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From GeneDx, SCV001916171.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	yes	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Dec 24, 2023

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