NM_001278689.2(EOGT):c.1575T>G (p.Asp525Glu) AND Inborn genetic diseases

This record was updated by the submitter. Please see the current version.

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Oct 18, 2022
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV002579610.2

Allele description

NM_001278689.2(EOGT):c.1575T>G (p.Asp525Glu)

Gene:

EOGT:EGF domain specific O-linked N-acetylglucosamine transferase [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

3p14.1

Genomic location:

Preferred name:

NM_001278689.2(EOGT):c.1575T>G (p.Asp525Glu)

HGVS:

NC_000003.12:g.68977627A>C
NG_042829.1:g.41268T>G
NM_001278689.2:c.1575T>GMANE SELECT
NM_173654.1:c.1323T>G
NM_173654.3:c.1323T>G
NP_001265618.1:p.Asp525Glu
NP_775925.1:p.Asp441Glu
NC_000003.11:g.69026778A>C
NR_103826.2:n.1830T>G

Protein change:

D441E

Links:

dbSNP: rs140481649

NCBI 1000 Genomes Browser:

rs140481649

Molecular consequence:

NM_001278689.2:c.1575T>G - missense variant - [Sequence Ontology: SO:0001583]
NM_173654.3:c.1323T>G - missense variant - [Sequence Ontology: SO:0001583]
NR_103826.2:n.1830T>G - non-coding transcript variant - [Sequence Ontology: SO:0001619]

Condition(s)

Name:: Inborn genetic diseases
Identifiers:: MeSH: D030342; MedGen: C0950123

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003602227	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Oct 18, 2022)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003602227

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Oct 18, 2022)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003602227.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.1323T>G (p.D441E) alteration is located in exon 15 (coding exon 12) of the EOGT gene. This alteration results from a T to G substitution at nucleotide position 1323, causing the aspartic acid (D) at amino acid position 441 to be replaced by a glutamic acid (E). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Sep 29, 2024

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