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NM_175914.5(HNF4A):c.1051A>G (p.Met351Val) AND not provided

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Nov 4, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV003482725.2

Allele description [Variation Report for NM_175914.5(HNF4A):c.1051A>G (p.Met351Val)]

NM_175914.5(HNF4A):c.1051A>G (p.Met351Val)

Gene:
HNF4A:hepatocyte nuclear factor 4 alpha [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
20q13.12
Genomic location:
Preferred name:
NM_175914.5(HNF4A):c.1051A>G (p.Met351Val)
HGVS:
  • NC_000020.11:g.44424242A>G
  • NG_009818.1:g.73442A>G
  • NM_000457.6:c.1117A>G
  • NM_001030003.3:c.1051A>G
  • NM_001030004.3:c.1051A>G
  • NM_001258355.2:c.1096A>G
  • NM_001287182.2:c.1042A>G
  • NM_001287183.2:c.1042A>G
  • NM_001287184.2:c.1042A>G
  • NM_175914.5:c.1051A>GMANE SELECT
  • NM_178849.3:c.1117A>G
  • NM_178850.3:c.1117A>G
  • NP_000448.3:p.Met373Val
  • NP_000448.3:p.Met373Val
  • NP_001025174.1:p.Met351Val
  • NP_001025175.1:p.Met351Val
  • NP_001245284.1:p.Met366Val
  • NP_001274111.1:p.Met348Val
  • NP_001274112.1:p.Met348Val
  • NP_001274112.1:p.Met348Val
  • NP_001274113.1:p.Met348Val
  • NP_787110.2:p.Met351Val
  • NP_787110.2:p.Met351Val
  • NP_849180.1:p.Met373Val
  • NP_849181.1:p.Met373Val
  • LRG_483t1:c.1051A>G
  • LRG_483t2:c.1117A>G
  • LRG_483t3:c.1042A>G
  • LRG_483:g.73442A>G
  • LRG_483p1:p.Met351Val
  • LRG_483p2:p.Met373Val
  • LRG_483p3:p.Met348Val
  • NC_000020.10:g.43052882A>G
  • NM_000457.4:c.1117A>G
  • NM_001287183.1:c.1042A>G
  • NM_175914.4:c.1051A>G
Protein change:
M348V
Molecular consequence:
  • NM_000457.6:c.1117A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001030003.3:c.1051A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001030004.3:c.1051A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001258355.2:c.1096A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001287182.2:c.1042A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001287183.2:c.1042A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001287184.2:c.1042A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_175914.5:c.1051A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_178849.3:c.1117A>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_178850.3:c.1117A>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
none provided
Identifiers:
MedGen: C3661900

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV004229707Athena Diagnostics
criteria provided, single submitter

(Athena Diagnostics Criteria)		Uncertain significance
(Nov 4, 2022) 		unknownclinical testing

PubMed (1)
[See all records that cite this PMID]

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedunknownunknownnot providednot providednot providednot providednot providedclinical testing

Citations

PubMed

A Standardized DNA Variant Scoring System for Pathogenicity Assessments in Mendelian Disorders.

Karbassi I, Maston GA, Love A, DiVincenzo C, Braastad CD, Elzinga CD, Bright AR, Previte D, Zhang K, Rowland CM, McCarthy M, Lapierre JL, Dubois F, Medeiros KA, Batish SD, Jones J, Liaquat K, Hoffman CA, Jaremko M, Wang Z, Sun W, Buller-Burckle A, et al.

Hum Mutat. 2016 Jan;37(1):127-34. doi: 10.1002/humu.22918. Epub 2015 Oct 29.

PubMed [citation]
PMID:
26467025
PMCID:
PMC4737317

Details of each submission

From Athena Diagnostics, SCV004229707.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testing PubMed (1)

Description

Available data are insufficient to determine the clinical significance of the variant at this time. This variant has not been reported in large, multi-ethnic general populations (http://gnomad.broadinstitute.org). At least one other missense variant at this codon is considered to be pathogenic or likely pathogenic, suggesting this variant may also cause disease. Computational tools predict that this variant is not damaging.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1unknownunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: May 7, 2024