NM_001329.4(CTBP2):c.58+11761_58+11762del AND CTBP2-related disorder

Germline classification:: Likely benign (1 submission)
Last evaluated:: May 9, 2022
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV003912829.2

Allele description [Variation Report for NM_001329.4(CTBP2):c.58+11761_58+11762del]

NM_001329.4(CTBP2):c.58+11761_58+11762del

Gene:

CTBP2:C-terminal binding protein 2 [Gene - OMIM - HGNC]

Variant type:

Deletion

Cytogenetic location:

10q26.13

Genomic location:

Preferred name:

NM_001329.4(CTBP2):c.58+11761_58+11762del

HGVS:

NC_000010.11:g.125027235_125027236del
NM_001083914.3:c.58+11761_58+11762del
NM_001290214.3:c.58+11761_58+11762del
NM_001290215.3:c.58+11761_58+11762del
NM_001321012.2:c.58+11761_58+11762del
NM_001321013.2:c.58+11761_58+11762del
NM_001321014.2:c.58+11761_58+11762del
NM_001329.4:c.58+11761_58+11762delMANE SELECT
NM_022802.3:c.524_525del
NP_073713.2:p.Gln175fs
NC_000010.10:g.126715804_126715805del
NM_022802.2:c.524_525del
NM_022802.2:c.524_525delAG

Protein change:

Q175fs

Links:

dbSNP: rs141864737

NCBI 1000 Genomes Browser:

rs141864737

Molecular consequence:

NM_022802.3:c.524_525del - frameshift variant - [Sequence Ontology: SO:0001589]
NM_001083914.3:c.58+11761_58+11762del - intron variant - [Sequence Ontology: SO:0001627]
NM_001290214.3:c.58+11761_58+11762del - intron variant - [Sequence Ontology: SO:0001627]
NM_001290215.3:c.58+11761_58+11762del - intron variant - [Sequence Ontology: SO:0001627]
NM_001321012.2:c.58+11761_58+11762del - intron variant - [Sequence Ontology: SO:0001627]
NM_001321013.2:c.58+11761_58+11762del - intron variant - [Sequence Ontology: SO:0001627]
NM_001321014.2:c.58+11761_58+11762del - intron variant - [Sequence Ontology: SO:0001627]
NM_001329.4:c.58+11761_58+11762del - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Name:: CTBP2-related disorder
Synonyms:: CTBP2-related condition
Identifiers:

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004729208	PreventionGenetics, part of Exact Sciences	no assertion criteria provided	Likely benign (May 9, 2022)	germline	clinical testing

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004729208

PreventionGenetics, part of Exact Sciences

no assertion criteria provided

Likely benign
(May 9, 2022)

germline

clinical testing

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From PreventionGenetics, part of Exact Sciences, SCV004729208.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

This variant is classified as likely benign based on ACMG/AMP sequence variant interpretation guidelines (Richards et al. 2015 PMID: 25741868, with internal and published modifications).

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 13, 2024

ClinVar

Relating variation to medicine