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NC_000007.13:g.(40117721_40118318)_(40118451_40127724)del AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
May 17, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004689476.1

Allele description [Variation Report for NC_000007.13:g.(40117721_40118318)_(40118451_40127724)del]

NC_000007.13:g.(40117721_40118318)_(40118451_40127724)del

Gene:
CDK13:cyclin dependent kinase 13 [Gene - OMIM - HGNC]
Variant type:
Deletion
Cytogenetic location:
7p14.1
Genomic location:
Chr7: 40117721 - 40127724 (on Assembly GRCh37)
Preferred name:
NC_000007.13:g.(40117721_40118318)_(40118451_40127724)del
HGVS:
NC_000007.13:g.(40117721_40118318)_(40118451_40127724)del

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV005185623Women's Health and Genetics/Laboratory Corporation of America, LabCorp
criteria provided, single submitter

(LabCorp Variant Classification Summary - May 2015)
Uncertain significance
(May 17, 2024)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Women's Health and Genetics/Laboratory Corporation of America, LabCorp, SCV005185623.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Variant summary: The variant involves the deletion of exon 11 in the CDK13 gene. A presumed nomenclature of c.(2897+1_2898-1)_(3029+1_3030-1)del has been designated for the purposes of this classification. This Copy Number Variant (CNV) is predicted to result in an in-frame deletion within this gene. The variant was absent in 21694 control chromosomes. The available data on variant occurrences in the general population are insufficient to allow any conclusion about variant significance. To our knowledge, no occurrence of c.(2897+1_2898-1)_(3029+1_3030-1)del in individuals affected with Congenital Heart Defects, Dysmorphic Facial Features, And Intellectual Developmental Disorder and no experimental evidence demonstrating its impact on protein function have been reported. No submitters have cited clinical-significance assessments for this variant to ClinVar. Based on the evidence outlined above, the variant was classified as uncertain significance.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Aug 18, 2024