NM_004655.4(AXIN2):c.1920A>C (p.Thr640=) AND Oligodontia-cancer predisposition syndrome

Germline classification:: Benign (1 submission)
Last evaluated:: Jul 9, 2024
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004790171.1

Allele description [Variation Report for NM_004655.4(AXIN2):c.1920A>C (p.Thr640=)]

NM_004655.4(AXIN2):c.1920A>C (p.Thr640=)

Gene:

AXIN2:axin 2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Genomic location:

Preferred name:

NM_004655.4(AXIN2):c.1920A>C (p.Thr640=)

HGVS:

NC_000017.11:g.65536541T>G
NG_012142.1:g.30082A>C
NM_001363813.1:c.1725A>C
NM_004655.4:c.1920A>CMANE SELECT
NP_001350742.1:p.Thr575=
NP_004646.3:p.Thr640=
NP_004646.3:p.Thr640=
LRG_296t1:c.1920A>C
LRG_296:g.30082A>C
LRG_296p1:p.Thr640=
NC_000017.10:g.63532659T>G
NM_004655.3:c.1920A>C

Molecular consequence:

NM_001363813.1:c.1725A>C - synonymous variant - [Sequence Ontology: SO:0001819]
NM_004655.4:c.1920A>C - synonymous variant - [Sequence Ontology: SO:0001819]

Condition(s)

Name:: Oligodontia-cancer predisposition syndrome
Synonyms:: TOOTH AGENESIS-COLORECTAL CANCER SYNDROME; Oligodontia-colorectal cancer syndrome
Identifiers:: MONDO: MONDO:0012075; MedGen: C1837750; Orphanet: 300576; OMIM: 608615

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV005407383	Myriad Genetics, Inc.	criteria provided, single submitter (Myriad Autosomal Dominant, Autosomal Recessive and X-Linked Classification Criteria (2023))	Benign (Jul 9, 2024)	unknown	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV005407383

Myriad Genetics, Inc.

criteria provided, single submitter

(Myriad Autosomal Dominant, Autosomal Recessive and X-Linked Classification Criteria (2023))

Benign
(Jul 9, 2024)

unknown

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	unknown	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Myriad Genetics, Inc., SCV005407383.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

This variant is considered benign. This variant is a silent/synonymous amino acid change and it is not expected to impact splicing.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	unknown	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 24, 2024

ClinVar

Relating variation to medicine