ClinVar Genomic variation as it relates to human health
NC_000023.10:g.(?_53222149)_(55057617_?)del
Germline
Classification
(1)
Pathogenic
criteria provided, single submitter
Somatic
No data submitted for somatic clinical impact
Somatic
No data submitted for oncogenicity
Genes
Gene | OMIM | ClinGen Gene Dosage Sensitivity Curation | Variation Viewer | Related variants | ||
---|---|---|---|---|---|---|
HI score | TS score | Within gene | All | |||
FGD1 | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
340 | 544 | |
IQSEC2 | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
1191 | 1350 | |
KDM5C | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
771 | 939 | |
PHF8 | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
208 | 359 | |
SMC1A | Sufficient evidence for dosage pathogenicity | No evidence available |
GRCh38 GRCh37 |
926 | 1094 | |
HSD17B10 | No evidence available | No evidence available |
GRCh38 GRCh37 |
166 | 325 | |
HUWE1 | No evidence available | No evidence available |
GRCh38 GRCh37 |
1390 | 1636 | |
ALAS2 | - | - |
GRCh38 GRCh37 |
199 | 409 | |
APEX2 | - | - |
GRCh38 GRCh37 |
30 | 163 | |
FAM120C | - | - |
GRCh38 GRCh37 |
30 | 180 |
There are 11 more genes affected by this variant. See the full set of genes in Variation Viewer (GRCh37) and ClinGen Dosage Sensitivity Map.
Conditions - Germline
Condition | Classification
(# of submissions) |
Review status | Last evaluated | Variation/condition record |
---|---|---|---|---|
Pathogenic (1) |
|
Nov 27, 2023 | RCV003109486.5 |
Citations for germline classification of this variant
HelpText-mined citations for this variant ...
HelpRecord last updated Sep 30, 2024