Reference

Reference documentation for report and file formats, the command-line interface (CLI), and REST API.

NCBI Datasets Command line interface (CLI) tool reference

Formats of Annotation Files available in NCBI Datasets Data Packages

NCBI Datasets Data Package report formats

NCBI Datasets provides sequence, annotation, metadata and other biological data as an NCBI Datasets Data Package zip archive.

Understanding the differences between GenBank (GCA) and RefSeq (GCF) genome assemblies

jq cheatsheet for parsing genome metadata from the datasets CLI summary command

OpenAPI 3.0 specification for NCBI Datasets v1 REST API

Generated November 25, 2024