Genome assembly ASM3193000v1

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NCBI RefSeq assembly
GCF_046052825.1
Submitted GenBank assembly
GCA_046052825.1
Taxon
Limnohabitans sp.
Isolate
L_335
WGS project
JAVLFP01
Submitter
McGill University - Macdonald Campus
Date
Dec 12, 2024

Genome notes

NCBI has noted the following for this genome assembly. View definitions

  • derived from metagenome

Assembly statistics

RefSeqGenBank
Genome size3.6 Mb3.6 Mb
Total ungapped length3.6 Mb3.6 Mb
Number of contigs109109
Contig N5058.3 kb58.3 kb
Contig L502020
GC percent58.558.5
Genome coverage10.0x10.0x
Assembly levelContigContig

Additional genomes

Browse all Vagococcus lutrae genomes (2)

BioProject

PRJNA983395

MAGs generated from freshwater PAH or alkane degrading cultures

Annotation details

RefSeq
ProviderNCBI RefSeq
NameGCF_046052825.1-RS_2024_12_16
DateDec 16, 2024
Genes3,546
Protein-coding3,449
Software version6.9

About PGAP

The NCBI Prokaryotic Genome Annotation Pipeline (PGAP) uses multiple approaches to predict protein-coding and RNA genes and other functional elements directly from sequence.

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Chromosomes

Note: This contig-level genome assembly includes 0 contigs and no assembled chromosomes.

Revision history

This record has not been revised

GenBank
RefSeq
Name
Level
Date
Action
GCA_046052825.1GCF_046052825.1ASM4605282v1ContigDec 12, 2024