Genome assembly ASM3193000v1
- NCBI RefSeq assembly
- GCF_046052825.1
- Submitted GenBank assembly
- GCA_046052825.1
- Taxon
- Limnohabitans sp.
- Isolate
- L_335
- WGS project
- JAVLFP01
- Submitter
- McGill University - Macdonald Campus
- Date
- Dec 12, 2024
Genome notes
NCBI has noted the following for this genome assembly. View definitions
- derived from metagenome
Assembly statistics
RefSeq | GenBank | |
---|---|---|
Genome size | 3.6 Mb | 3.6 Mb |
Total ungapped length | 3.6 Mb | 3.6 Mb |
Number of contigs | 109 | 109 |
Contig N50 | 58.3 kb | 58.3 kb |
Contig L50 | 20 | 20 |
GC percent | 58.5 | 58.5 |
Genome coverage | 10.0x | 10.0x |
Assembly level | Contig | Contig |
Additional genomes
Browse all Vagococcus lutrae genomes (2)BioProject
PRJNA983395MAGs generated from freshwater PAH or alkane degrading cultures
Annotation details
RefSeq | |
---|---|
Provider | NCBI RefSeq |
Name | GCF_046052825.1-RS_2024_12_16 |
Date | Dec 16, 2024 |
Genes | 3,546 |
Protein-coding | 3,449 |
Software version | 6.9 |
About PGAP
The NCBI Prokaryotic Genome Annotation Pipeline (PGAP) uses multiple approaches to predict protein-coding and RNA genes and other functional elements directly from sequence.
Continue readingChromosomes
Note: This contig-level genome assembly includes 0 contigs and no assembled chromosomes.
Revision history
This record has not been revised
GenBank | RefSeq | Name | Level | Date | Action |
---|---|---|---|---|---|
GCA_046052825.1 | GCF_046052825.1 | ASM4605282v1 | Contig | Dec 12, 2024 |