estd215 (GoNL)
- Organism:
- Human
- Study Type:
- Control Set
- Submitter:
- Morris Swertz
- Submitter URL:
- http://www.nlgenome.nl/
- Submitter version:
- Release 5
- Description:
- GoNL is a whole-genome-sequencing project in a representative sample consisting of 250 trio-families from all provinces in the Netherlands, which aims to characterize DNA sequence variation in the Dutch population. The parent-offspring trios include adult individuals ranging in age from 19 to 87 years (mean=53 years; SD=16 years) from birth cohorts 1910-1994. See Variant Summary counts for estd215 in dbVar Variant Summary.
- Project:
- PRJEB5829
- Publication(s):
- Boomsma et al. 2013
Detailed Information: Download 28083 Variant Regions, Download 28083 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Submitted: GRCh37 (hg19)
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.11 | Chr1 | 1,989 | 1,989 | Remapped | NC_000001.11 |
| NC_000002.12 | Chr2 | 2,232 | 2,232 | Remapped | NC_000002.12 |
| NC_000003.12 | Chr3 | 1,691 | 1,691 | Remapped | NC_000003.12 |
| NC_000004.12 | Chr4 | 1,896 | 1,896 | Remapped | NC_000004.12 |
| NC_000005.10 | Chr5 | 1,662 | 1,662 | Remapped | NC_000005.10 |
| NC_000006.12 | Chr6 | 1,749 | 1,749 | Remapped | NC_000006.12 |
| NC_000007.14 | Chr7 | 1,690 | 1,690 | Remapped | NC_000007.14 |
| NC_000008.11 | Chr8 | 1,413 | 1,413 | Remapped | NC_000008.11 |
| NC_000009.12 | Chr9 | 1,149 | 1,149 | Remapped | NC_000009.12 |
| NC_000010.11 | Chr10 | 1,332 | 1,332 | Remapped | NC_000010.11 |
| NC_000011.10 | Chr11 | 1,292 | 1,292 | Remapped | NC_000011.10 |
| NC_000012.12 | Chr12 | 1,379 | 1,379 | Remapped | NC_000012.12 |
| NC_000013.11 | Chr13 | 982 | 982 | Remapped | NC_000013.11 |
| NC_000014.9 | Chr14 | 870 | 870 | Remapped | NC_000014.9 |
| NC_000015.10 | Chr15 | 718 | 718 | Remapped | NC_000015.10 |
| NC_000016.10 | Chr16 | 877 | 877 | Remapped | NC_000016.10 |
| NC_000017.11 | Chr17 | 899 | 899 | Remapped | NC_000017.11 |
| NC_000018.10 | Chr18 | 794 | 794 | Remapped | NC_000018.10 |
| NC_000019.10 | Chr19 | 797 | 797 | Remapped | NC_000019.10 |
| NC_000020.11 | Chr20 | 618 | 618 | Remapped | NC_000020.11 |
| NC_000021.9 | Chr21 | 450 | 450 | Remapped | NC_000021.9 |
| NC_000022.11 | Chr22 | 450 | 450 | Remapped | NC_000022.11 |
| NC_000023.11 | ChrX | 1,011 | 1,011 | Remapped | NC_000023.11 |
| NC_000024.10 | ChrY | 33 | 33 | Remapped | NC_000024.10 |
| NT_187514.1 | Chr1|NT_187514.1 | 1 | 1 | Remapped | NT_187514.1 |
| NT_187515.1 | Chr1|NT_187515.1 | 8 | 8 | Remapped | NT_187515.1 |
| NT_187516.1 | Chr1|NT_187516.1 | 5 | 5 | Remapped | NT_187516.1 |
| NT_187518.1 | Chr1|NT_187518.1 | 2 | 2 | Remapped | NT_187518.1 |
| NT_187519.1 | Chr1|NT_187519.1 | 9 | 9 | Remapped | NT_187519.1 |
| NT_187521.1 | Chr1|NT_187521.1 | 1 | 1 | Remapped | NT_187521.1 |
| NT_187646.1 | Chr1|NT_187646.1 | 2 | 2 | Remapped | NT_187646.1 |
| NW_003315906.1 | Chr1|NW_003315906.1 | 1 | 1 | Remapped | NW_003315906.1 |
| NW_003315907.2 | Chr1|NW_003315907.2 | 4 | 4 | Remapped | NW_003315907.2 |
| NW_009646194.1 | Chr1|NW_009646194.1 | 4 | 4 | Remapped | NW_009646194.1 |
| NW_011332687.1 | Chr1|NW_011332687.1 | 5 | 5 | Remapped | NW_011332687.1 |
| NW_011332688.1 | Chr1|NW_011332688.1 | 6 | 6 | Remapped | NW_011332688.1 |
| NW_014040926.1 | Chr1|NW_014040926.1 | 3 | 3 | Remapped | NW_014040926.1 |
| NW_014040927.1 | Chr1|NW_014040927.1 | 2 | 2 | Remapped | NW_014040927.1 |
| NW_017852928.1 | Chr1|NW_017852928.1 | 2 | 2 | Remapped | NW_017852928.1 |
| NW_018654706.1 | Chr1|NW_018654706.1 | 2 | 2 | Remapped | NW_018654706.1 |
| NW_018654707.1 | Chr1|NW_018654707.1 | 4 | 4 | Remapped | NW_018654707.1 |
| NW_018654708.1 | Chr1|NW_018654708.1 | 5 | 5 | Remapped | NW_018654708.1 |
| NW_019805487.1 | Chr1|NW_019805487.1 | 1 | 1 | Remapped | NW_019805487.1 |
| NT_187522.1 | Chr2|NT_187522.1 | 3 | 3 | Remapped | NT_187522.1 |
| NT_187523.1 | Chr2|NT_187523.1 | 5 | 5 | Remapped | NT_187523.1 |
| NT_187524.1 | Chr2|NT_187524.1 | 1 | 1 | Remapped | NT_187524.1 |
| NT_187526.1 | Chr2|NT_187526.1 | 3 | 3 | Remapped | NT_187526.1 |
| NT_187527.1 | Chr2|NT_187527.1 | 1 | 1 | Remapped | NT_187527.1 |
| NT_187528.1 | Chr2|NT_187528.1 | 1 | 1 | Remapped | NT_187528.1 |
| NT_187529.1 | Chr2|NT_187529.1 | 13 | 13 | Remapped | NT_187529.1 |
| NT_187531.1 | Chr2|NT_187531.1 | 1 | 1 | Remapped | NT_187531.1 |
| NT_187647.1 | Chr2|NT_187647.1 | 5 | 5 | Remapped | NT_187647.1 |
| NW_011332689.1 | Chr2|NW_011332689.1 | 7 | 7 | Remapped | NW_011332689.1 |
| NW_011332690.1 | Chr2|NW_011332690.1 | 11 | 11 | Remapped | NW_011332690.1 |
| NW_012132915.1 | Chr2|NW_012132915.1 | 6 | 6 | Remapped | NW_012132915.1 |
| NW_015495299.1 | Chr2|NW_015495299.1 | 5 | 5 | Remapped | NW_015495299.1 |
| NW_018654710.1 | Chr2|NW_018654710.1 | 3 | 3 | Remapped | NW_018654710.1 |
| NT_187678.1 | Chr3|NT_187678.1 | 4 | 4 | Remapped | NT_187678.1 |
| NT_187688.1 | Chr3|NT_187688.1 | 6 | 6 | Remapped | NT_187688.1 |
| NT_187689.1 | Chr3|NT_187689.1 | 6 | 6 | Remapped | NT_187689.1 |
| NT_187690.1 | Chr3|NT_187690.1 | 6 | 6 | Remapped | NT_187690.1 |
| NT_187691.1 | Chr3|NT_187691.1 | 6 | 6 | Remapped | NT_187691.1 |
| NT_187532.1 | Chr3|NT_187532.1 | 5 | 5 | Remapped | NT_187532.1 |
| NT_187533.1 | Chr3|NT_187533.1 | 1 | 1 | Remapped | NT_187533.1 |
| NT_187535.1 | Chr3|NT_187535.1 | 3 | 3 | Remapped | NT_187535.1 |
| NT_187537.1 | Chr3|NT_187537.1 | 2 | 2 | Remapped | NT_187537.1 |
| NT_187538.1 | Chr3|NT_187538.1 | 1 | 1 | Remapped | NT_187538.1 |
| NT_187539.1 | Chr3|NT_187539.1 | 1 | 1 | Remapped | NT_187539.1 |
| NT_187649.1 | Chr3|NT_187649.1 | 6 | 6 | Remapped | NT_187649.1 |
| NW_003871060.2 | Chr3|NW_003871060.2 | 2 | 2 | Remapped | NW_003871060.2 |
| NW_009646197.1 | Chr3|NW_009646197.1 | 2 | 2 | Remapped | NW_009646197.1 |
| NW_011332691.1 | Chr3|NW_011332691.1 | 2 | 2 | Remapped | NW_011332691.1 |
| NW_012132916.1 | Chr3|NW_012132916.1 | 5 | 5 | Remapped | NW_012132916.1 |
| NW_017363813.1 | Chr3|NW_017363813.1 | 5 | 5 | Remapped | NW_017363813.1 |
| NW_018654711.1 | Chr3|NW_018654711.1 | 1 | 1 | Remapped | NW_018654711.1 |
| NW_019805488.1 | Chr3|NW_019805488.1 | 2 | 2 | Remapped | NW_019805488.1 |
| NW_019805489.1 | Chr3|NW_019805489.1 | 2 | 2 | Remapped | NW_019805489.1 |
| NW_019805492.1 | Chr3|NW_019805492.1 | 1 | 1 | Remapped | NW_019805492.1 |
| NT_187679.1 | Chr4|NT_187679.1 | 13 | 13 | Remapped | NT_187679.1 |
| NT_113793.3 | Chr4|NT_113793.3 | 1 | 1 | Remapped | NT_113793.3 |
| NT_187540.1 | Chr4|NT_187540.1 | 2 | 2 | Remapped | NT_187540.1 |
| NT_187542.1 | Chr4|NT_187542.1 | 1 | 1 | Remapped | NT_187542.1 |
| NT_187543.1 | Chr4|NT_187543.1 | 6 | 6 | Remapped | NT_187543.1 |
| NT_187544.1 | Chr4|NT_187544.1 | 1 | 1 | Remapped | NT_187544.1 |
| NT_187545.1 | Chr4|NT_187545.1 | 4 | 4 | Remapped | NT_187545.1 |
| NT_187650.1 | Chr4|NT_187650.1 | 6 | 6 | Remapped | NT_187650.1 |
| NW_003315915.1 | Chr4|NW_003315915.1 | 3 | 3 | Remapped | NW_003315915.1 |
| NW_013171800.1 | Chr4|NW_013171800.1 | 1 | 1 | Remapped | NW_013171800.1 |
| NW_013171801.1 | Chr4|NW_013171801.1 | 1 | 1 | Remapped | NW_013171801.1 |
| NW_017363814.1 | Chr4|NW_017363814.1 | 1 | 1 | Remapped | NW_017363814.1 |
| NT_187546.1 | Chr5|NT_187546.1 | 1 | 1 | Remapped | NT_187546.1 |
| NT_187547.1 | Chr5|NT_187547.1 | 6 | 6 | Remapped | NT_187547.1 |
| NT_187548.1 | Chr5|NT_187548.1 | 8 | 8 | Remapped | NT_187548.1 |
| NT_187549.1 | Chr5|NT_187549.1 | 2 | 2 | Remapped | NT_187549.1 |
| NT_187550.1 | Chr5|NT_187550.1 | 7 | 7 | Remapped | NT_187550.1 |
| NT_187551.1 | Chr5|NT_187551.1 | 1 | 1 | Remapped | NT_187551.1 |
| NT_187651.1 | Chr5|NT_187651.1 | 2 | 2 | Remapped | NT_187651.1 |
| NT_187652.1 | Chr5|NT_187652.1 | 2 | 2 | Remapped | NT_187652.1 |
| NW_003315917.2 | Chr5|NW_003315917.2 | 4 | 4 | Remapped | NW_003315917.2 |
| NW_003315918.1 | Chr5|NW_003315918.1 | 1 | 1 | Remapped | NW_003315918.1 |
| NW_003315919.1 | Chr5|NW_003315919.1 | 1 | 1 | Remapped | NW_003315919.1 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 1 | 1 | Remapped | NW_003315920.1 |
| NW_009646199.1 | Chr5|NW_009646199.1 | 1 | 1 | Remapped | NW_009646199.1 |
| NW_016107297.1 | Chr5|NW_016107297.1 | 4 | 4 | Remapped | NW_016107297.1 |
| NW_016107298.1 | Chr5|NW_016107298.1 | 10 | 10 | Remapped | NW_016107298.1 |
| NW_018654712.1 | Chr5|NW_018654712.1 | 1 | 1 | Remapped | NW_018654712.1 |
| NT_187692.1 | Chr6|NT_187692.1 | 3 | 3 | Remapped | NT_187692.1 |
| NT_187552.1 | Chr6|NT_187552.1 | 7 | 7 | Remapped | NT_187552.1 |
| NT_187553.1 | Chr6|NT_187553.1 | 4 | 4 | Remapped | NT_187553.1 |
| NT_187555.1 | Chr6|NT_187555.1 | 4 | 4 | Remapped | NT_187555.1 |
| NT_187556.1 | Chr6|NT_187556.1 | 5 | 5 | Remapped | NT_187556.1 |
| NT_187557.1 | Chr6|NT_187557.1 | 4 | 4 | Remapped | NT_187557.1 |
| NW_004166862.2 | Chr6|NW_004166862.2 | 7 | 7 | Remapped | NW_004166862.2 |
| NW_009646200.1 | Chr6|NW_009646200.1 | 3 | 3 | Remapped | NW_009646200.1 |
| NW_012132918.1 | Chr6|NW_012132918.1 | 4 | 4 | Remapped | NW_012132918.1 |
| NW_017363815.1 | Chr6|NW_017363815.1 | 1 | 1 | Remapped | NW_017363815.1 |
| NW_018654713.1 | Chr6|NW_018654713.1 | 5 | 5 | Remapped | NW_018654713.1 |
| NT_187558.1 | Chr7|NT_187558.1 | 7 | 7 | Remapped | NT_187558.1 |
| NT_187559.1 | Chr7|NT_187559.1 | 2 | 2 | Remapped | NT_187559.1 |
| NT_187560.1 | Chr7|NT_187560.1 | 5 | 5 | Remapped | NT_187560.1 |
| NT_187561.1 | Chr7|NT_187561.1 | 2 | 2 | Remapped | NT_187561.1 |
| NT_187562.1 | Chr7|NT_187562.1 | 12 | 12 | Remapped | NT_187562.1 |
| NT_187563.1 | Chr7|NT_187563.1 | 3 | 3 | Remapped | NT_187563.1 |
| NT_187564.1 | Chr7|NT_187564.1 | 4 | 4 | Remapped | NT_187564.1 |
| NT_187653.1 | Chr7|NT_187653.1 | 7 | 7 | Remapped | NT_187653.1 |
| NW_012132919.1 | Chr7|NW_012132919.1 | 2 | 2 | Remapped | NW_012132919.1 |
| NW_017852929.1 | Chr7|NW_017852929.1 | 3 | 3 | Remapped | NW_017852929.1 |
| NW_017852930.1 | Chr7|NW_017852930.1 | 2 | 2 | Remapped | NW_017852930.1 |
| NW_018654715.1 | Chr7|NW_018654715.1 | 1 | 1 | Remapped | NW_018654715.1 |
| NW_019805493.1 | Chr7|NW_019805493.1 | 1 | 1 | Remapped | NW_019805493.1 |
| NT_187680.1 | Chr8|NT_187680.1 | 5 | 5 | Remapped | NT_187680.1 |
| NT_187565.1 | Chr8|NT_187565.1 | 9 | 9 | Remapped | NT_187565.1 |
| NT_187567.1 | Chr8|NT_187567.1 | 6 | 6 | Remapped | NT_187567.1 |
| NT_187568.1 | Chr8|NT_187568.1 | 13 | 13 | Remapped | NT_187568.1 |
| NT_187569.1 | Chr8|NT_187569.1 | 1 | 1 | Remapped | NT_187569.1 |
| NT_187571.1 | Chr8|NT_187571.1 | 4 | 4 | Remapped | NT_187571.1 |
| NT_187572.1 | Chr8|NT_187572.1 | 1 | 1 | Remapped | NT_187572.1 |
| NT_187573.1 | Chr8|NT_187573.1 | 1 | 1 | Remapped | NT_187573.1 |
| NT_187574.1 | Chr8|NT_187574.1 | 3 | 3 | Remapped | NT_187574.1 |
| NT_187576.1 | Chr8|NT_187576.1 | 38 | 38 | Remapped | NT_187576.1 |
| NT_187577.1 | Chr8|NT_187577.1 | 4 | 4 | Remapped | NT_187577.1 |
| NT_187654.1 | Chr8|NT_187654.1 | 5 | 5 | Remapped | NT_187654.1 |
| NT_187655.1 | Chr8|NT_187655.1 | 5 | 5 | Remapped | NT_187655.1 |
| NW_017852931.1 | Chr8|NW_017852931.1 | 1 | 1 | Remapped | NW_017852931.1 |
| NW_017852932.1 | Chr8|NW_017852932.1 | 1 | 1 | Remapped | NW_017852932.1 |
| NW_018654716.1 | Chr8|NW_018654716.1 | 3 | 3 | Remapped | NW_018654716.1 |
| NW_018654717.1 | Chr8|NW_018654717.1 | 55 | 55 | Remapped | NW_018654717.1 |
| NT_187578.1 | Chr9|NT_187578.1 | 3 | 3 | Remapped | NT_187578.1 |
| NW_003315928.1 | Chr9|NW_003315928.1 | 1 | 1 | Remapped | NW_003315928.1 |
| NW_003315930.1 | Chr9|NW_003315930.1 | 2 | 2 | Remapped | NW_003315930.1 |
| NW_003315931.1 | Chr9|NW_003315931.1 | 1 | 1 | Remapped | NW_003315931.1 |
| NW_009646201.1 | Chr9|NW_009646201.1 | 3 | 3 | Remapped | NW_009646201.1 |
| NW_013171804.1 | Chr9|NW_013171804.1 | 3 | 3 | Remapped | NW_013171804.1 |
| NW_013171805.1 | Chr9|NW_013171805.1 | 2 | 2 | Remapped | NW_013171805.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 4 | 4 | Remapped | NW_003315934.1 |
| NW_003315935.1 | Chr10|NW_003315935.1 | 1 | 1 | Remapped | NW_003315935.1 |
| NW_009646202.1 | Chr10|NW_009646202.1 | 2 | 2 | Remapped | NW_009646202.1 |
| NW_013171806.1 | Chr10|NW_013171806.1 | 4 | 4 | Remapped | NW_013171806.1 |
| NW_013171807.1 | Chr10|NW_013171807.1 | 2 | 2 | Remapped | NW_013171807.1 |
| NT_187681.1 | Chr11|NT_187681.1 | 4 | 4 | Remapped | NT_187681.1 |
| NT_187657.1 | Chr11|NT_187657.1 | 4 | 4 | Remapped | NT_187657.1 |
| NT_187581.1 | Chr11|NT_187581.1 | 1 | 1 | Remapped | NT_187581.1 |
| NT_187582.1 | Chr11|NT_187582.1 | 2 | 2 | Remapped | NT_187582.1 |
| NT_187583.1 | Chr11|NT_187583.1 | 1 | 1 | Remapped | NT_187583.1 |
| NT_187584.1 | Chr11|NT_187584.1 | 6 | 6 | Remapped | NT_187584.1 |
| NT_187585.1 | Chr11|NT_187585.1 | 2 | 2 | Remapped | NT_187585.1 |
| NT_187586.1 | Chr11|NT_187586.1 | 2 | 2 | Remapped | NT_187586.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 2 | 2 | Remapped | NW_003315936.1 |
| NW_003871074.1 | Chr11|NW_003871074.1 | 1 | 1 | Remapped | NW_003871074.1 |
| NW_009646203.1 | Chr11|NW_009646203.1 | 1 | 1 | Remapped | NW_009646203.1 |
| NW_011332695.1 | Chr11|NW_011332695.1 | 1 | 1 | Remapped | NW_011332695.1 |
| NW_013171808.1 | Chr11|NW_013171808.1 | 2 | 2 | Remapped | NW_013171808.1 |
| NW_015148966.1 | Chr11|NW_015148966.1 | 5 | 5 | Remapped | NW_015148966.1 |
| NW_017363816.1 | Chr11|NW_017363816.1 | 1 | 1 | Remapped | NW_017363816.1 |
| NW_019805495.1 | Chr11|NW_019805495.1 | 3 | 3 | Remapped | NW_019805495.1 |
| NW_019805496.1 | Chr11|NW_019805496.1 | 5 | 5 | Remapped | NW_019805496.1 |
| NW_019805497.1 | Chr11|NW_019805497.1 | 4 | 4 | Remapped | NW_019805497.1 |
| NT_187658.1 | Chr12|NT_187658.1 | 4 | 4 | Remapped | NT_187658.1 |
| NT_187587.1 | Chr12|NT_187587.1 | 7 | 7 | Remapped | NT_187587.1 |
| NT_187589.1 | Chr12|NT_187589.1 | 1 | 1 | Remapped | NT_187589.1 |
| NT_187591.1 | Chr12|NT_187591.1 | 1 | 1 | Remapped | NT_187591.1 |
| NW_003315938.1 | Chr12|NW_003315938.1 | 2 | 2 | Remapped | NW_003315938.1 |
| NW_003315939.2 | Chr12|NW_003315939.2 | 2 | 2 | Remapped | NW_003315939.2 |
| NW_003315940.1 | Chr12|NW_003315940.1 | 3 | 3 | Remapped | NW_003315940.1 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 1 | 1 | Remapped | NW_003315941.1 |
| NW_003315942.2 | Chr12|NW_003315942.2 | 2 | 2 | Remapped | NW_003315942.2 |
| NW_003571049.1 | Chr12|NW_003571049.1 | 3 | 3 | Remapped | NW_003571049.1 |
| NW_003571050.1 | Chr12|NW_003571050.1 | 4 | 4 | Remapped | NW_003571050.1 |
| NW_009646204.1 | Chr12|NW_009646204.1 | 2 | 2 | Remapped | NW_009646204.1 |
| NW_011332696.1 | Chr12|NW_011332696.1 | 9 | 9 | Remapped | NW_011332696.1 |
| NW_013171809.1 | Chr12|NW_013171809.1 | 1 | 1 | Remapped | NW_013171809.1 |
| NW_015148967.1 | Chr12|NW_015148967.1 | 4 | 4 | Remapped | NW_015148967.1 |
| NW_018654718.1 | Chr12|NW_018654718.1 | 17 | 17 | Remapped | NW_018654718.1 |
| NW_018654719.1 | Chr12|NW_018654719.1 | 1 | 1 | Remapped | NW_018654719.1 |
| NW_018654720.1 | Chr12|NW_018654720.1 | 2 | 2 | Remapped | NW_018654720.1 |
| NW_019805499.1 | Chr12|NW_019805499.1 | 1 | 1 | Remapped | NW_019805499.1 |
| NT_187592.1 | Chr13|NT_187592.1 | 7 | 7 | Remapped | NT_187592.1 |
| NT_187593.1 | Chr13|NT_187593.1 | 2 | 2 | Remapped | NT_187593.1 |
| NT_187594.1 | Chr13|NT_187594.1 | 2 | 2 | Remapped | NT_187594.1 |
| NT_187595.1 | Chr13|NT_187595.1 | 1 | 1 | Remapped | NT_187595.1 |
| NT_187596.1 | Chr13|NT_187596.1 | 1 | 1 | Remapped | NT_187596.1 |
| NT_187597.1 | Chr13|NT_187597.1 | 2 | 2 | Remapped | NT_187597.1 |
| NW_009646205.1 | Chr13|NW_009646205.1 | 1 | 1 | Remapped | NW_009646205.1 |
| NW_011332698.1 | Chr13|NW_011332698.1 | 10 | 10 | Remapped | NW_011332698.1 |
| NW_011332699.1 | Chr13|NW_011332699.1 | 3 | 3 | Remapped | NW_011332699.1 |
| NW_011332700.1 | Chr13|NW_011332700.1 | 1 | 1 | Remapped | NW_011332700.1 |
| NW_013171810.1 | Chr13|NW_013171810.1 | 3 | 3 | Remapped | NW_013171810.1 |
| NW_013171811.1 | Chr13|NW_013171811.1 | 3 | 3 | Remapped | NW_013171811.1 |
| NT_113796.3 | Chr14|NT_113796.3 | 1 | 1 | Remapped | NT_113796.3 |
| NT_187598.1 | Chr14|NT_187598.1 | 2 | 2 | Remapped | NT_187598.1 |
| NT_187600.1 | Chr14|NT_187600.1 | 20 | 20 | Remapped | NT_187600.1 |
| NT_187601.1 | Chr14|NT_187601.1 | 21 | 21 | Remapped | NT_187601.1 |
| NW_018654721.1 | Chr14|NW_018654721.1 | 1 | 1 | Remapped | NW_018654721.1 |
| NW_018654722.1 | Chr14|NW_018654722.1 | 10 | 10 | Remapped | NW_018654722.1 |
| NT_187659.1 | Chr15|NT_187659.1 | 1 | 1 | Remapped | NT_187659.1 |
| NT_187660.1 | Chr15|NT_187660.1 | 19 | 19 | Remapped | NT_187660.1 |
| NT_187603.1 | Chr15|NT_187603.1 | 1 | 1 | Remapped | NT_187603.1 |
| NT_187605.1 | Chr15|NT_187605.1 | 1 | 1 | Remapped | NT_187605.1 |
| NT_187606.1 | Chr15|NT_187606.1 | 2 | 2 | Remapped | NT_187606.1 |
| NW_003315943.1 | Chr15|NW_003315943.1 | 1 | 1 | Remapped | NW_003315943.1 |
| NW_003315944.2 | Chr15|NW_003315944.2 | 6 | 6 | Remapped | NW_003315944.2 |
| NW_011332701.1 | Chr15|NW_011332701.1 | 20 | 20 | Remapped | NW_011332701.1 |
| NT_187607.1 | Chr16|NT_187607.1 | 18 | 18 | Remapped | NT_187607.1 |
| NT_187608.1 | Chr16|NT_187608.1 | 2 | 2 | Remapped | NT_187608.1 |
| NT_187609.1 | Chr16|NT_187609.1 | 1 | 1 | Remapped | NT_187609.1 |
| NT_187610.1 | Chr16|NT_187610.1 | 3 | 3 | Remapped | NT_187610.1 |
| NW_012132921.1 | Chr16|NW_012132921.1 | 1 | 1 | Remapped | NW_012132921.1 |
| NW_013171812.1 | Chr16|NW_013171812.1 | 1 | 1 | Remapped | NW_013171812.1 |
| NW_017852933.1 | Chr16|NW_017852933.1 | 5 | 5 | Remapped | NW_017852933.1 |
| NW_019805500.1 | Chr16|NW_019805500.1 | 6 | 6 | Remapped | NW_019805500.1 |
| NT_187661.1 | Chr17|NT_187661.1 | 1 | 1 | Remapped | NT_187661.1 |
| NT_187662.1 | Chr17|NT_187662.1 | 13 | 13 | Remapped | NT_187662.1 |
| NT_187663.1 | Chr17|NT_187663.1 | 17 | 17 | Remapped | NT_187663.1 |
| NT_187664.1 | Chr17|NT_187664.1 | 9 | 9 | Remapped | NT_187664.1 |
| NW_003871093.1 | Chr17|NW_003871093.1 | 2 | 2 | Remapped | NW_003871093.1 |
| NT_167251.2 | Chr17|NT_167251.2 | 1 | 1 | Remapped | NT_167251.2 |
| NT_187611.1 | Chr17|NT_187611.1 | 4 | 4 | Remapped | NT_187611.1 |
| NT_187612.1 | Chr17|NT_187612.1 | 11 | 11 | Remapped | NT_187612.1 |
| NT_187613.1 | Chr17|NT_187613.1 | 13 | 13 | Remapped | NT_187613.1 |
| NT_187614.1 | Chr17|NT_187614.1 | 35 | 35 | Remapped | NT_187614.1 |
| NT_187615.1 | Chr17|NT_187615.1 | 2 | 2 | Remapped | NT_187615.1 |
| NW_003315952.3 | Chr17|NW_003315952.3 | 16 | 16 | Remapped | NW_003315952.3 |
| NW_003315953.2 | Chr17|NW_003315953.2 | 1 | 1 | Remapped | NW_003315953.2 |
| NW_003315954.1 | Chr17|NW_003315954.1 | 2 | 2 | Remapped | NW_003315954.1 |
| NW_003315955.1 | Chr17|NW_003315955.1 | 3 | 3 | Remapped | NW_003315955.1 |
| NW_003871091.1 | Chr17|NW_003871091.1 | 4 | 4 | Remapped | NW_003871091.1 |
| NW_003871092.1 | Chr17|NW_003871092.1 | 1 | 1 | Remapped | NW_003871092.1 |
| NW_016107299.1 | Chr17|NW_016107299.1 | 3 | 3 | Remapped | NW_016107299.1 |
| NW_017363817.1 | Chr17|NW_017363817.1 | 7 | 7 | Remapped | NW_017363817.1 |
| NW_017363818.1 | Chr17|NW_017363818.1 | 3 | 3 | Remapped | NW_017363818.1 |
| NW_017363819.1 | Chr17|NW_017363819.1 | 4 | 4 | Remapped | NW_017363819.1 |
| NT_187665.1 | Chr18|NT_187665.1 | 9 | 9 | Remapped | NT_187665.1 |
| NT_187666.1 | Chr18|NT_187666.1 | 1 | 1 | Remapped | NT_187666.1 |
| NT_187617.1 | Chr18|NT_187617.1 | 3 | 3 | Remapped | NT_187617.1 |
| NW_003315956.1 | Chr18|NW_003315956.1 | 4 | 4 | Remapped | NW_003315956.1 |
| NW_003315957.1 | Chr18|NW_003315957.1 | 2 | 2 | Remapped | NW_003315957.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 7 | 7 | Remapped | NW_003315958.1 |
| NW_003315959.1 | Chr18|NW_003315959.1 | 2 | 2 | Remapped | NW_003315959.1 |
| NW_003315960.1 | Chr18|NW_003315960.1 | 1 | 1 | Remapped | NW_003315960.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 1 | 1 | Remapped | NW_003315961.1 |
| NW_013171814.1 | Chr18|NW_013171814.1 | 7 | 7 | Remapped | NW_013171814.1 |
| NW_014040928.1 | Chr18|NW_014040928.1 | 2 | 2 | Remapped | NW_014040928.1 |
| NW_018654724.1 | Chr18|NW_018654724.1 | 3 | 3 | Remapped | NW_018654724.1 |
| NW_019805502.1 | Chr18|NW_019805502.1 | 1 | 1 | Remapped | NW_019805502.1 |
| NW_019805503.1 | Chr18|NW_019805503.1 | 2 | 2 | Remapped | NW_019805503.1 |
| NT_187693.1 | Chr19|NT_187693.1 | 28 | 28 | Remapped | NT_187693.1 |
| NW_003571061.2 | Chr19|NW_003571061.2 | 18 | 18 | Remapped | NW_003571061.2 |
| NW_003571057.2 | Chr19|NW_003571057.2 | 14 | 14 | Remapped | NW_003571057.2 |
| NW_003571058.2 | Chr19|NW_003571058.2 | 14 | 14 | Remapped | NW_003571058.2 |
| NW_003571059.2 | Chr19|NW_003571059.2 | 14 | 14 | Remapped | NW_003571059.2 |
| NW_003571060.1 | Chr19|NW_003571060.1 | 20 | 20 | Remapped | NW_003571060.1 |
| NW_003571056.2 | Chr19|NW_003571056.2 | 14 | 14 | Remapped | NW_003571056.2 |
| NW_003571055.2 | Chr19|NW_003571055.2 | 17 | 17 | Remapped | NW_003571055.2 |
| NT_187620.1 | Chr19|NT_187620.1 | 2 | 2 | Remapped | NT_187620.1 |
| NT_187621.1 | Chr19|NT_187621.1 | 2 | 2 | Remapped | NT_187621.1 |
| NT_187622.1 | Chr19|NT_187622.1 | 2 | 2 | Remapped | NT_187622.1 |
| NW_003315962.1 | Chr19|NW_003315962.1 | 5 | 5 | Remapped | NW_003315962.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 3 | 3 | Remapped | NW_003315963.1 |
| NW_003315964.2 | Chr19|NW_003315964.2 | 2 | 2 | Remapped | NW_003315964.2 |
| NW_003315965.1 | Chr19|NW_003315965.1 | 1 | 1 | Remapped | NW_003315965.1 |
| NW_003571054.1 | Chr19|NW_003571054.1 | 21 | 21 | Remapped | NW_003571054.1 |
| NW_009646206.1 | Chr19|NW_009646206.1 | 6 | 6 | Remapped | NW_009646206.1 |
| NW_014040929.1 | Chr19|NW_014040929.1 | 4 | 4 | Remapped | NW_014040929.1 |
| NT_187623.1 | Chr20|NT_187623.1 | 4 | 4 | Remapped | NT_187623.1 |
| NT_187624.1 | Chr20|NT_187624.1 | 1 | 1 | Remapped | NT_187624.1 |
| NT_187625.1 | Chr20|NT_187625.1 | 1 | 1 | Remapped | NT_187625.1 |
| NW_003315966.2 | Chr20|NW_003315966.2 | 2 | 2 | Remapped | NW_003315966.2 |
| NT_187626.1 | Chr21|NT_187626.1 | 3 | 3 | Remapped | NT_187626.1 |
| NT_187628.1 | Chr21|NT_187628.1 | 2 | 2 | Remapped | NT_187628.1 |
| NW_003315967.2 | Chr21|NW_003315967.2 | 1 | 1 | Remapped | NW_003315967.2 |
| NW_003315968.2 | Chr21|NW_003315968.2 | 3 | 3 | Remapped | NW_003315968.2 |
| NW_003315970.2 | Chr21|NW_003315970.2 | 1 | 1 | Remapped | NW_003315970.2 |
| NW_015148969.1 | Chr22|NW_015148969.1 | 1 | 1 | Remapped | NW_015148969.1 |
| NT_187629.1 | Chr22|NT_187629.1 | 1 | 1 | Remapped | NT_187629.1 |
| NT_187630.1 | Chr22|NT_187630.1 | 3 | 3 | Remapped | NT_187630.1 |
| NT_187631.1 | Chr22|NT_187631.1 | 2 | 2 | Remapped | NT_187631.1 |
| NT_187632.1 | Chr22|NT_187632.1 | 3 | 3 | Remapped | NT_187632.1 |
| NT_187633.1 | Chr22|NT_187633.1 | 5 | 5 | Remapped | NT_187633.1 |
| NW_003315972.2 | Chr22|NW_003315972.2 | 1 | 1 | Remapped | NW_003315972.2 |
| NT_187667.1 | ChrX|NT_187667.1 | 24 | 24 | Remapped | NT_187667.1 |
| NW_017363820.1 | ChrX|NW_017363820.1 | 1 | 1 | Remapped | NW_017363820.1 |
| NT_187634.1 | ChrX|NT_187634.1 | 24 | 24 | Remapped | NT_187634.1 |
| NT_187635.1 | ChrX|NT_187635.1 | 1 | 1 | Remapped | NT_187635.1 |
| NW_009646209.1 | ChrY|NW_009646209.1 | 5 | 5 | Remapped | NW_009646209.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.10 | Chr1 | 1,999 | 1,999 | Submitted | NC_000001.10 |
| NC_000002.11 | Chr2 | 2,232 | 2,232 | Submitted | NC_000002.11 |
| NC_000003.11 | Chr3 | 1,694 | 1,694 | Submitted | NC_000003.11 |
| NC_000004.11 | Chr4 | 1,897 | 1,897 | Submitted | NC_000004.11 |
| NC_000005.9 | Chr5 | 1,663 | 1,663 | Submitted | NC_000005.9 |
| NC_000006.11 | Chr6 | 1,750 | 1,750 | Submitted | NC_000006.11 |
| NC_000007.13 | Chr7 | 1,697 | 1,697 | Submitted | NC_000007.13 |
| NC_000008.10 | Chr8 | 1,425 | 1,425 | Submitted | NC_000008.10 |
| NC_000009.11 | Chr9 | 1,151 | 1,151 | Submitted | NC_000009.11 |
| NC_000010.10 | Chr10 | 1,334 | 1,334 | Submitted | NC_000010.10 |
| NC_000011.9 | Chr11 | 1,294 | 1,294 | Submitted | NC_000011.9 |
| NC_000012.11 | Chr12 | 1,380 | 1,380 | Submitted | NC_000012.11 |
| NC_000013.10 | Chr13 | 983 | 983 | Submitted | NC_000013.10 |
| NC_000014.8 | Chr14 | 882 | 882 | Submitted | NC_000014.8 |
| NC_000015.9 | Chr15 | 720 | 720 | Submitted | NC_000015.9 |
| NC_000016.9 | Chr16 | 879 | 879 | Submitted | NC_000016.9 |
| NC_000017.10 | Chr17 | 913 | 913 | Submitted | NC_000017.10 |
| NC_000018.9 | Chr18 | 794 | 794 | Submitted | NC_000018.9 |
| NC_000019.9 | Chr19 | 813 | 813 | Submitted | NC_000019.9 |
| NC_000020.10 | Chr20 | 618 | 618 | Submitted | NC_000020.10 |
| NC_000021.8 | Chr21 | 450 | 450 | Submitted | NC_000021.8 |
| NC_000022.10 | Chr22 | 460 | 460 | Submitted | NC_000022.10 |
| NC_000023.10 | ChrX | 1,022 | 1,022 | Submitted | NC_000023.10 |
| NC_000024.9 | ChrY | 33 | 33 | Submitted | NC_000024.9 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.10 | Chr1 | 1,999 | 1,913 | 7 | 6 | 8 | 65 | 1,999 | 1,913 | 7 | 6 | 8 | 65 |
| NC_000002.11 | Chr2 | 2,232 | 2,166 | 5 | 1 | 0 | 60 | 2,232 | 2,166 | 5 | 1 | 0 | 60 |
| NC_000003.11 | Chr3 | 1,694 | 1,654 | 0 | 1 | 3 | 36 | 1,694 | 1,654 | 0 | 1 | 3 | 36 |
| NC_000004.11 | Chr4 | 1,897 | 1,864 | 4 | 0 | 1 | 28 | 1,897 | 1,864 | 4 | 0 | 1 | 28 |
| NC_000005.9 | Chr5 | 1,663 | 1,613 | 0 | 1 | 1 | 48 | 1,663 | 1,613 | 0 | 1 | 1 | 48 |
| NC_000006.11 | Chr6 | 1,750 | 1,701 | 1 | 0 | 1 | 47 | 1,750 | 1,701 | 1 | 0 | 1 | 47 |
| NC_000007.13 | Chr7 | 1,697 | 1,642 | 7 | 2 | 4 | 42 | 1,697 | 1,642 | 7 | 2 | 4 | 42 |
| NC_000008.10 | Chr8 | 1,425 | 1,283 | 0 | 0 | 2 | 140 | 1,425 | 1,283 | 0 | 0 | 2 | 140 |
| NC_000009.11 | Chr9 | 1,151 | 1,134 | 0 | 0 | 2 | 15 | 1,151 | 1,134 | 0 | 0 | 2 | 15 |
| NC_000010.10 | Chr10 | 1,334 | 1,318 | 1 | 0 | 2 | 13 | 1,334 | 1,318 | 1 | 0 | 2 | 13 |
| NC_000011.9 | Chr11 | 1,294 | 1,252 | 0 | 1 | 2 | 39 | 1,294 | 1,252 | 0 | 1 | 2 | 39 |
| NC_000012.11 | Chr12 | 1,380 | 1,312 | 1 | 0 | 1 | 66 | 1,380 | 1,312 | 1 | 0 | 1 | 66 |
| NC_000013.10 | Chr13 | 983 | 951 | 0 | 0 | 0 | 32 | 983 | 951 | 0 | 0 | 0 | 32 |
| NC_000014.8 | Chr14 | 882 | 811 | 4 | 3 | 11 | 53 | 882 | 811 | 4 | 3 | 11 | 53 |
| NC_000015.9 | Chr15 | 720 | 686 | 1 | 0 | 2 | 31 | 720 | 686 | 1 | 0 | 2 | 31 |
| NC_000016.9 | Chr16 | 879 | 832 | 4 | 4 | 2 | 37 | 879 | 832 | 4 | 4 | 2 | 37 |
| NC_000017.10 | Chr17 | 913 | 791 | 2 | 0 | 2 | 118 | 913 | 791 | 2 | 0 | 2 | 118 |
| NC_000018.9 | Chr18 | 794 | 757 | 0 | 0 | 0 | 37 | 794 | 757 | 0 | 0 | 0 | 37 |
| NC_000019.9 | Chr19 | 813 | 750 | 4 | 4 | 4 | 51 | 813 | 750 | 4 | 4 | 4 | 51 |
| NC_000020.10 | Chr20 | 618 | 609 | 0 | 1 | 0 | 8 | 618 | 609 | 0 | 1 | 0 | 8 |
| NC_000021.8 | Chr21 | 450 | 438 | 0 | 0 | 0 | 12 | 450 | 438 | 0 | 0 | 0 | 12 |
| NC_000022.10 | Chr22 | 460 | 425 | 3 | 6 | 10 | 16 | 460 | 425 | 3 | 6 | 10 | 16 |
| NC_000023.10 | ChrX | 1,022 | 957 | 14 | 14 | 11 | 26 | 1,022 | 957 | 14 | 14 | 11 | 26 |
| NC_000024.9 | ChrY | 33 | 28 | 0 | 0 | 0 | 5 | 33 | 28 | 0 | 0 | 0 | 5 |
Samplesets
Number of Samplesets: 1
- Size:
- 767
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
| Sample ID | Subject ID | Subject Phenotype |
|---|---|---|
| ERS383404 | gonl-29c | Not reported |
| ERS383400 | gonl-28b | Not reported |
| ERS383358 | gonl-15a | Not reported |
| ERS383409 | gonl-31b | Not reported |
| ERS383405 | gonl-30a | Not reported |
| ERS383397 | gonl-27b | Not reported |
| ERS383338 | gonl-8c | Not reported |
| ERS383331 | gonl-6c | Not reported |
| ERS383370 | gonl-19a | Not reported |
| ERS383324 | gonl-4b | Not reported |
| ERS383327 | gonl-5b | Not reported |
| ERS383315 | gonl-1b | Not reported |
| ERS383399 | gonl-28a | Not reported |
| ERS383364 | gonl-17a | Not reported |
| ERS383371 | gonl-19b | Not reported |
| ERS383318 | gonl-2b | Not reported |
| ERS383340 | gonl-9a | Not reported |
| ERS383347 | gonl-11b | Not reported |
| ERS383386 | gonl-23c | Not reported |
| ERS383383 | gonl-22c | Not reported |
| ERS383413 | gonl-32c | Not reported |
| ERS383345 | gonl-10c | Not reported |
| ERS383394 | gonl-26b | Not reported |
| ERS383403 | gonl-29b | Not reported |
| ERS383384 | gonl-23a | Not reported |
| ERS383322 | gonl-3c | Not reported |
| ERS383336 | gonl-8a | Not reported |
| ERS383328 | gonl-5c | Not reported |
| ERS383410 | gonl-31c | Not reported |
| ERS383401 | gonl-28c | Not reported |
| ERS383382 | gonl-22b | Not reported |
| ERS383406 | gonl-30b | Not reported |
| ERS383344 | gonl-10b | Not reported |
| ERS383389 | gonl-24c | Not reported |
| ERS383365 | gonl-17b | Not reported |
| ERS383395 | gonl-26c | Not reported |
| ERS383362 | gonl-16b | Not reported |
| ERS383329 | gonl-6a | Not reported |
| ERS383326 | gonl-5a | Not reported |
| ERS383314 | gonl-1a | Not reported |
| ERS383339 | gonl-8d | Not reported |
| ERS383388 | gonl-24b | Not reported |
| ERS383316 | gonl-1c | Not reported |
| ERS383396 | gonl-27a | Not reported |
| ERS383343 | gonl-10a | Not reported |
| ERS383369 | gonl-18c | Not reported |
| ERS383407 | gonl-30c | Not reported |
| ERS383393 | gonl-26a | Not reported |
| ERS383366 | gonl-17c | Not reported |
| ERS383332 | gonl-7a | Not reported |
| ERS383398 | gonl-27c | Not reported |
| ERS383337 | gonl-8b | Not reported |
| ERS383341 | gonl-9b | Not reported |
| ERS383342 | gonl-9c | Not reported |
| ERS383349 | gonl-12a | Not reported |
| ERS383402 | gonl-29a | Not reported |
| ERS383391 | gonl-25b | Not reported |
| ERS383352 | gonl-13a | Not reported |
| ERS383368 | gonl-18b | Not reported |
| ERS383348 | gonl-11c | Not reported |
| ERS383320 | gonl-3a | Not reported |
| ERS383325 | gonl-4c | Not reported |
| ERS383380 | gonl-21c | Not reported |
| ERS383333 | gonl-7b | Not reported |
| ERS383408 | gonl-31a | Not reported |
| ERS383412 | gonl-32b | Not reported |
| ERS383390 | gonl-25a | Not reported |
| ERS383411 | gonl-32a | Not reported |
| ERS383392 | gonl-25c | Not reported |
| ERS383374 | gonl-20a | Not reported |
| ERS383335 | gonl-7d | Not reported |
| ERS383317 | gonl-2a | Not reported |
| ERS383385 | gonl-23b | Not reported |
| ERS383355 | gonl-14a | Not reported |
| ERS383377 | gonl-20d | Not reported |
| ERS383376 | gonl-20c | Not reported |
| ERS383387 | gonl-24a | Not reported |
| ERS383346 | gonl-11a | Not reported |
| ERS383375 | gonl-20b | Not reported |
| ERS383319 | gonl-2c | Not reported |
| ERS383350 | gonl-12b | Not reported |
| ERS383378 | gonl-21a | Not reported |
| ERS383323 | gonl-4a | Not reported |
| ERS383360 | gonl-15c | Not reported |
| ERS383373 | gonl-19d | Not reported |
| ERS383372 | gonl-19c | Not reported |
| ERS383351 | gonl-12c | Not reported |
| ERS383354 | gonl-13c | Not reported |
| ERS383363 | gonl-16c | Not reported |
| ERS383381 | gonl-22a | Not reported |
| ERS383334 | gonl-7c | Not reported |
| ERS383359 | gonl-15b | Not reported |
| ERS383353 | gonl-13b | Not reported |
| ERS383321 | gonl-3b | Not reported |
| ERS383357 | gonl-14c | Not reported |
| ERS383379 | gonl-21b | Not reported |
| ERS383330 | gonl-6b | Not reported |
| ERS383361 | gonl-16a | Not reported |
| ERS383367 | gonl-18a | Not reported |
| ERS383356 | gonl-14b | Not reported |
Experimental Details
| Experiment ID | Type | Method | Analysis | Platforms | Number of Variant Calls |
|---|---|---|---|---|---|
| 1 | Discovery | Sequencing | Sequence alignment | Illumina HiSeq 2000 | 28,083 |