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Study ID | Variant ID | Variant Region type | Variant Call type | Sampleset ID | Method | Analysis ID | Validation | Variant samples | Subject phenotype | Clinical Interpretation | Assembly | Accession | Chr | Outer-Start | Start | Inner-Start | Inner-End | End | Outer-End | Placement Type | Remap Score |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
nstd91 | nssv3217056 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000001.11 | 1 | 2490325 | 2517553 | Remapped | 1 | ||||||
nstd91 | nssv3217057 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000001.11 | 1 | 204312847 | 204371108 | Remapped | 1 | ||||||
nstd91 | nssv3217058 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000001.11 | 1 | 205507666 | 205586137 | Remapped | 1 | ||||||
nstd91 | nssv3217059 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000001.11 | 1 | 2801306 | 2833619 | Remapped | 1 | ||||||
nstd91 | nssv3217060 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 53634583 | 53728300 | Remapped | 1 | ||||||
nstd91 | nssv3217061 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 84500467 | 84547696 | Remapped | 1 | ||||||
nstd91 | nssv3217062 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 40996107 | 41033530 | Remapped | 1 | ||||||
nstd91 | nssv3217063 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 90070132 | 90190677 | Remapped | 0.99992 | ||||||
nstd91 | nssv3217064 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 1508915 | 1587710 | Remapped | 1 | ||||||
nstd91 | nssv3217065 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 218325617 | 218426591 | Remapped | 1 | ||||||
nstd91 | nssv3217066 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 232441486 | 232479078 | Remapped | 1 | ||||||
nstd91 | nssv3217067 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 232636543 | 232675920 | Remapped | 1 | ||||||
nstd91 | nssv3217068 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 240460318 | 240500334 | Remapped | 1 | ||||||
nstd91 | nssv3217069 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 240881590 | 240925080 | Remapped | 1 | ||||||
nstd91 | nssv3217070 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 13868012 | 13910387 | Remapped | 1 | ||||||
nstd91 | nssv3217071 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 109303916 | 109325429 | Remapped | 1 | ||||||
nstd91 | nssv3217072 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 130914662 | 131009538 | Remapped | 1 | ||||||
nstd91 | nssv3217073 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 176118796 | 176163936 | Remapped | 1 | ||||||
nstd91 | nssv3217074 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 232860742 | 232898255 | Remapped | 1 | ||||||
nstd91 | nssv3217075 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 233818103 | 233831983 | Remapped | 1 | ||||||
nstd91 | nssv3217076 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 239273923 | 239316388 | Remapped | 1.00002 | ||||||
nstd91 | nssv3217077 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 240415206 | 240460318 | Remapped | 1 | ||||||
nstd91 | nssv3217078 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 240764867 | 240804754 | Remapped | 1 | ||||||
nstd91 | nssv3217079 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 241550606 | 241975799 | Remapped | 0.99361 | ||||||
nstd91 | nssv3217080 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 2802738 | 2837022 | Remapped | 1 | ||||||
nstd91 | nssv3217081 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 47010769 | 47043394 | Remapped | 1 | ||||||
nstd91 | nssv3217082 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 47043394 | 47080222 | Remapped | 1 | ||||||
nstd91 | nssv3217083 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 53422140 | 53458513 | Remapped | 1 | ||||||
nstd91 | nssv3217084 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 85424307 | 85458400 | Remapped | 1 | ||||||
nstd91 | nssv3217085 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 96270535 | 96285401 | Remapped | 1 | ||||||
nstd91 | nssv3217086 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 154294871 | 154375866 | Remapped | 1.00001 | ||||||
nstd91 | nssv3217087 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000002.12 | 2 | 185096233 | 185202807 | Remapped | 1 | ||||||
nstd91 | nssv3217088 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 126102657 | 126135942 | Remapped | 1 | ||||||
nstd91 | nssv3217089 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 126371930 | 126427878 | Remapped | 1 | ||||||
nstd91 | nssv3217090 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 126427878 | 126477195 | Remapped | 1 | ||||||
nstd91 | nssv3217091 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 126926099 | 127065745 | Remapped | 1 | ||||||
nstd91 | nssv3217092 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 127065745 | 127106276 | Remapped | 1 | ||||||
nstd91 | nssv3217093 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 13582439 | 13623678 | Remapped | 1 | ||||||
nstd91 | nssv3217094 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 184170891 | 184278755 | Remapped | 1 | ||||||
nstd91 | nssv3217095 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 195225071 | 195263850 | Remapped | 1 | ||||||
nstd91 | nssv3217096 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 50436260 | 50631879 | Remapped | 1 | ||||||
nstd91 | nssv3217097 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | confers sensitivity | GRCh38.p12 | NC_000003.12 | 3 | 52021954 | 52251666 | Remapped | 1 | ||||||
nstd91 | nssv3217098 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 52251666 | 52482099 | Remapped | 1 | ||||||
nstd91 | nssv3217099 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 52482099 | 52833059 | Remapped | 1 | ||||||
nstd91 | nssv3217100 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000003.12 | 3 | 8605720 | 8631872 | Remapped | 1 | ||||||
nstd91 | nssv3217101 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000004.12 | 4 | 107403208 | 107460168 | Remapped | 1 | ||||||
nstd91 | nssv3217102 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000004.12 | 4 | 167891580 | 168093814 | Remapped | 1 | ||||||
nstd91 | nssv3217103 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000004.12 | 4 | 27886097 | 27918021 | Remapped | 1 | ||||||
nstd91 | nssv3217104 | copy number gain | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000005.10 | 5 | 21609944 | 21646360 | Remapped | 1 | ||||||
nstd91 | nssv3217105 | copy number loss | 1 | SNP array | SNP genotyping analysis | No | Glomerulonephritis, IGA | association | GRCh38.p12 | NC_000005.10 | 5 | 151613448 | 151668610 | Remapped | 1 | ||||||
nstd91 | nsv984437 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 47043394 | 47080222 | Remapped | 1 | |||||||||||
nstd91 | nsv984438 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 53422140 | 53458513 | Remapped | 1 | |||||||||||
nstd91 | nsv984439 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 53634583 | 53728300 | Remapped | 1 | |||||||||||
nstd91 | nsv984440 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 84500467 | 84547696 | Remapped | 1 | |||||||||||
nstd91 | nsv984441 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 90070132 | 90190677 | Remapped | 0.99992 | |||||||||||
nstd91 | nsv984442 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 85424307 | 85458400 | Remapped | 1 | |||||||||||
nstd91 | nsv984443 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 154294871 | 154375866 | Remapped | 1.00001 | |||||||||||
nstd91 | nsv984444 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 185096233 | 185202807 | Remapped | 1 | |||||||||||
nstd91 | nsv984445 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 109303916 | 109325429 | Remapped | 1 | |||||||||||
nstd91 | nsv984446 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 130914662 | 131009538 | Remapped | 1 | |||||||||||
nstd91 | nsv984447 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 176118796 | 176163936 | Remapped | 1 | |||||||||||
nstd91 | nsv984448 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 218325617 | 218426591 | Remapped | 1 | |||||||||||
nstd91 | nsv984449 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 232441486 | 232479078 | Remapped | 1 | |||||||||||
nstd91 | nsv984450 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 96270535 | 96285401 | Remapped | 1 | |||||||||||
nstd91 | nsv984451 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 232636543 | 232675920 | Remapped | 1 | |||||||||||
nstd91 | nsv984452 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 232860742 | 232898255 | Remapped | 1 | |||||||||||
nstd91 | nsv984453 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 233818103 | 233831983 | Remapped | 1 | |||||||||||
nstd91 | nsv984454 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 239273923 | 239316388 | Remapped | 1.00002 | |||||||||||
nstd91 | nsv984455 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 240415206 | 240460318 | Remapped | 1 | |||||||||||
nstd91 | nsv984456 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 240460318 | 240500334 | Remapped | 1 | |||||||||||
nstd91 | nsv984457 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 240764867 | 240804754 | Remapped | 1 | |||||||||||
nstd91 | nsv984458 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 240881590 | 240925080 | Remapped | 1 | |||||||||||
nstd91 | nsv984459 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 241550606 | 241975799 | Remapped | 0.99361 | |||||||||||
nstd91 | nsv984460 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 126102657 | 126135942 | Remapped | 1 | |||||||||||
nstd91 | nsv984517 | copy number variation | No | GRCh38.p12 | NC_000001.11 | 1 | 204312847 | 204371108 | Remapped | 1 | |||||||||||
nstd91 | nsv984518 | copy number variation | No | GRCh38.p12 | NC_000001.11 | 1 | 205507666 | 205586137 | Remapped | 1 | |||||||||||
nstd91 | nsv984519 | copy number variation | No | GRCh38.p12 | NC_000001.11 | 1 | 2490325 | 2517553 | Remapped | 1 | |||||||||||
nstd91 | nsv984520 | copy number variation | No | GRCh38.p12 | NC_000001.11 | 1 | 2801306 | 2833619 | Remapped | 1 | |||||||||||
nstd91 | nsv984528 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 13868012 | 13910387 | Remapped | 1 | |||||||||||
nstd91 | nsv984529 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 40996107 | 41033530 | Remapped | 1 | |||||||||||
nstd91 | nsv984530 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 1508915 | 1587710 | Remapped | 1 | |||||||||||
nstd91 | nsv984531 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 2802738 | 2837022 | Remapped | 1 | |||||||||||
nstd91 | nsv984532 | copy number variation | No | GRCh38.p12 | NC_000002.12 | 2 | 47010769 | 47043394 | Remapped | 1 | |||||||||||
nstd91 | nsv984533 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 126371930 | 126427878 | Remapped | 1 | |||||||||||
nstd91 | nsv984534 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 126427878 | 126477195 | Remapped | 1 | |||||||||||
nstd91 | nsv984535 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 126926099 | 127065745 | Remapped | 1 | |||||||||||
nstd91 | nsv984536 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 127065745 | 127106276 | Remapped | 1 | |||||||||||
nstd91 | nsv984537 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 13582439 | 13623678 | Remapped | 1 | |||||||||||
nstd91 | nsv984538 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 184170891 | 184278755 | Remapped | 1 | |||||||||||
nstd91 | nsv984539 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 195225071 | 195263850 | Remapped | 1 | |||||||||||
nstd91 | nsv984540 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 50436260 | 50631879 | Remapped | 1 | |||||||||||
nstd91 | nsv984541 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 52021954 | 52251666 | Remapped | 1 | |||||||||||
nstd91 | nsv984542 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 52251666 | 52482099 | Remapped | 1 | |||||||||||
nstd91 | nsv984563 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 52482099 | 52833059 | Remapped | 1 | |||||||||||
nstd91 | nsv984564 | copy number variation | No | GRCh38.p12 | NC_000003.12 | 3 | 8605720 | 8631872 | Remapped | 1 | |||||||||||
nstd91 | nsv984565 | copy number variation | No | GRCh38.p12 | NC_000004.12 | 4 | 107403208 | 107460168 | Remapped | 1 | |||||||||||
nstd91 | nsv984566 | copy number variation | No | GRCh38.p12 | NC_000004.12 | 4 | 167891580 | 168093814 | Remapped | 1 | |||||||||||
nstd91 | nsv984567 | copy number variation | No | GRCh38.p12 | NC_000004.12 | 4 | 27886097 | 27918021 | Remapped | 1 | |||||||||||
nstd91 | nsv984568 | copy number variation | No | GRCh38.p12 | NC_000005.10 | 5 | 21609944 | 21646360 | Remapped | 1 | |||||||||||
nstd91 | nsv984569 | copy number variation | No | GRCh38.p12 | NC_000005.10 | 5 | 151613448 | 151668610 | Remapped | 1 |