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dbVar

Database of genomic structural variation

esv3811127

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:28,367

Description:
Chr7:g.112100187_112134387>chr7:112105784_112106021
Publication(s):Forbes et al. 2008, Forbes et al. 2008, Stephens et al. 2009

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 148 SVs from 37 studies. See in: genome view

Remapped(Score: Perfect):112,460,132-112,465,729

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv3811127	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	112,460,132	112,465,729
esv3811127	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	112,465,966	112,494,332
esv3811127	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	112,100,187	112,105,784
esv3811127	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	112,106,021	112,134,387

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16620492	intrachromosomal translocation	1126076	Curated	Curated	208
essv16638008	intrachromosomal translocation	1126076	Curated	Curated	208

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
essv16620492	Remapped	Perfect	GRCh38.p12	First Pass	NC_000007.14	Chr7	112,460,132	112,460,132	not reported
essv16638008	Remapped	Perfect	GRCh38.p12	First Pass	NC_000007.14	Chr7	112,465,966	112,465,966	not reported
essv16620492	Submitted genomic		GRCh37 (hg19)		NC_000007.13	Chr7	112,100,187	112,100,187	not reported
essv16638008	Submitted genomic		GRCh37 (hg19)		NC_000007.13	Chr7	112,106,021	112,106,021	not reported

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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